Detail information of GWHGAAEX017869/evm.TU.scaffold_88.55


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392377429|ref|YP_004984588.1|1.00E-27iron-sulfur cluster insertion protein [Azospirillum brasilense Sp245]
KOGKOG11191.00E-46Mitochondrial Fe-S cluster biosynthesis protein ISA2 (contains a HesB-like domain)
nrgi|672188931|ref|XP_008813709.1|1.01E-69PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Phoenix dactylifera]
Swissprottr|Q8LCY2|ISAM2_ARATH1.00E-50Iron-sulfur assembly protein IscA-like 2, mitochondrial (Precursor)
trEMBLtr|C5YK75|C5YK75_SORBI2.00E-62Putative uncharacterized protein Sb07g014910 {ECO:0000313|EMBL:EES14875.1}
TAIRAT5G039001.00E-46Iron-sulphur cluster biosynthesis family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009513301291350058+
Transcript Sequence

Network for GWHGAAEX017869

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01521.19Fe-S_biosyn611634.10E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0097428Biological Processprotein maturation by iron-sulfur cluster transfer
GO:0005198Molecular Functionstructural molecule activity
GO:0051536Molecular Functioniron-sulfur cluster binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms53.590
SRR2545915Juvenile tuber44.690
SRP108465SRR5643513five period of Gastrodia elata22.360
SRR5643514five period of Gastrodia elata21.040
SRR5643515five period of Gastrodia elata21.480
SRR5643524five period of Gastrodia elata25.260
SRR5643525five period of Gastrodia elata58.110
SRR5643528five period of Gastrodia elata62.000
SRR5643658five period of Gastrodia elata60.330
SRR5643659five period of Gastrodia elata19.920
SRR5643660five period of Gastrodia elata18.840
SRR5643661five period of Gastrodia elata17.340
SRR5643662five period of Gastrodia elata15.700
SRR5643663five period of Gastrodia elata18.010
SRR5643664five period of Gastrodia elata16.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_116.960
SRR6049655Rhizomagastrodiae_C368-T10_good_18.760
SRR6049656Rhizomagastrodiae_C368-T07_good_114.670
SRR6049657Rhizomagastrodiae_C368-T07_good_123.480
SRR6049658Rhizomagastrodiae_C368-T04_good_127.270
SRR6049659Rhizomagastrodiae_C368-T04_good_131.620
SRR6049660Rhizomagastrodiae_C368-T01_good_116.630
SRR6049661Rhizomagastrodiae_C368-T04_good_123.510
SRR6049662Rhizomagastrodiae_C368-T01_good_114.360
SRR6049663Rhizomagastrodiae_C368-T01_good_116.960
SRR6049664Rhizomagastrodiae_C368-T10_good_117.610
SRR6049665Rhizomagastrodiae_C368-T10_good_117.610
SRP279888GastroGastrodia elata tuber 19.02
JuvenJuvenile tuber16.08
Mother_GastroMother tuber of Gastrodia elata 33.98
Mother_JuvenMother tuber of Juvenile 22.11