Detail information of GWHGAAEX017872/evm.TU.scaffold_88.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428201920|ref|YP_007080509.1|3.00E-79DNA repair exonuclease [Pleurocapsa sp. PCC 7327]
nrgi|695067757|ref|XP_009380800.1|5.61E-133PREDICTED: uncharacterized protein LOC103969096 [Musa acuminata subsp. malaccensis]
trEMBLtr|A0A067F7H2|A0A067F7H2_CITSI2.00E-128Uncharacterized protein {ECO:0000313|EMBL:KDO59442.1}
TAIRAT5G582005.00E-78Calcineurin-like metallo-phosphoesterase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009514395331468203-
Transcript Sequence

Network for GWHGAAEX017872

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00149.27Metallophos62145.20E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.000
SRR2545915Juvenile tuber10.920
SRP108465SRR5643513five period of Gastrodia elata4.630
SRR5643514five period of Gastrodia elata7.130
SRR5643515five period of Gastrodia elata6.850
SRR5643524five period of Gastrodia elata6.190
SRR5643525five period of Gastrodia elata3.420
SRR5643528five period of Gastrodia elata5.080
SRR5643658five period of Gastrodia elata5.290
SRR5643659five period of Gastrodia elata3.140
SRR5643660five period of Gastrodia elata2.540
SRR5643661five period of Gastrodia elata3.780
SRR5643662five period of Gastrodia elata2.060
SRR5643663five period of Gastrodia elata2.980
SRR5643664five period of Gastrodia elata4.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.750
SRR6049655Rhizomagastrodiae_C368-T10_good_18.420
SRR6049656Rhizomagastrodiae_C368-T07_good_15.490
SRR6049657Rhizomagastrodiae_C368-T07_good_15.620
SRR6049658Rhizomagastrodiae_C368-T04_good_16.720
SRR6049659Rhizomagastrodiae_C368-T04_good_18.320
SRR6049660Rhizomagastrodiae_C368-T01_good_15.910
SRR6049661Rhizomagastrodiae_C368-T04_good_17.380
SRR6049662Rhizomagastrodiae_C368-T01_good_16.880
SRR6049663Rhizomagastrodiae_C368-T01_good_17.090
SRR6049664Rhizomagastrodiae_C368-T10_good_18.440
SRR6049665Rhizomagastrodiae_C368-T10_good_18.440
SRP279888GastroGastrodia elata tuber 4.49
JuvenJuvenile tuber4.16
Mother_GastroMother tuber of Gastrodia elata 12.02
Mother_JuvenMother tuber of Juvenile 7.07