Detail information of GWHGAAEX017874/evm.TU.scaffold_88.65


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337285964|ref|YP_004625437.1|2.00E-124alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
KOGKOG10500Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|743767620|ref|XP_010914078.1|0PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Elaeis guineensis]
Swissprottr|Q9LRA7|TPS9_ARATH0Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
trEMBLtr|M5Y1S3|M5Y1S3_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ28208.1}
TAIRAT1G680200UDP-Glycosyltransferase / trehalose-phosphatase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009515840561589587+
Transcript Sequence

Network for GWHGAAEX017874

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00982.20Glyco_transf_20535352.60E-164
PF02358.15Trehalose_PPase5858199.70E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16055TPS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms56.390
SRR2545915Juvenile tuber23.500
SRP108465SRR5643513five period of Gastrodia elata21.770
SRR5643514five period of Gastrodia elata20.500
SRR5643515five period of Gastrodia elata55.600
SRR5643524five period of Gastrodia elata35.280
SRR5643525five period of Gastrodia elata71.950
SRR5643528five period of Gastrodia elata164.470
SRR5643658five period of Gastrodia elata82.860
SRR5643659five period of Gastrodia elata34.050
SRR5643660five period of Gastrodia elata22.210
SRR5643661five period of Gastrodia elata33.280
SRR5643662five period of Gastrodia elata51.070
SRR5643663five period of Gastrodia elata22.240
SRR5643664five period of Gastrodia elata40.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.300
SRR6049655Rhizomagastrodiae_C368-T10_good_130.100
SRR6049656Rhizomagastrodiae_C368-T07_good_133.680
SRR6049657Rhizomagastrodiae_C368-T07_good_161.040
SRR6049658Rhizomagastrodiae_C368-T04_good_168.450
SRR6049659Rhizomagastrodiae_C368-T04_good_1103.420
SRR6049660Rhizomagastrodiae_C368-T01_good_173.370
SRR6049661Rhizomagastrodiae_C368-T04_good_181.780
SRR6049662Rhizomagastrodiae_C368-T01_good_116.850
SRR6049663Rhizomagastrodiae_C368-T01_good_138.170
SRR6049664Rhizomagastrodiae_C368-T10_good_115.230
SRR6049665Rhizomagastrodiae_C368-T10_good_115.230
SRP279888GastroGastrodia elata tuber 15.91
JuvenJuvenile tuber6.45
Mother_GastroMother tuber of Gastrodia elata 249.80
Mother_JuvenMother tuber of Juvenile 129.58