Detail information of GWHGAAEX017896/evm.TU.scaffold_88.92


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|383761408|ref|YP_005440390.1|4.00E-111monogalactosyldiacylglycerol synthase family protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
nrgi|743767524|ref|XP_010914027.1|0PREDICTED: monogalactosyldiacylglycerol synthase 1, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q9FZL4|MGDG_SOYBN0Probable monogalactosyldiacylglycerol synthase, chloroplastic (Precursor)
trEMBLtr|B9HB80|B9HB80_POPTR0MGDG synthase type A family protein {ECO:0000313|EMBL:EEE93212.1}
TAIRAT4G317800monogalactosyl diacylglycerol synthase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009526125592635050-
Transcript Sequence

Network for GWHGAAEX017896

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06925.10MGDG_synth1393074.40E-60
PF04101.15Glyco_tran_28_C3664321.20E-08
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT28

KEGG pathway

KO Enzyme pathway mapID
K03715MGD Metabolic pathways map01100
Glycerolipid metabolismmap00561

Gene Ontology

GO term OntologyName
GO:0009247Biological Processglycolipid biosynthetic process
GO:0016758Molecular Functiontransferase activity, transferring hexosyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.960
SRR2545915Juvenile tuber23.130
SRP108465SRR5643513five period of Gastrodia elata18.400
SRR5643514five period of Gastrodia elata23.920
SRR5643515five period of Gastrodia elata19.070
SRR5643524five period of Gastrodia elata16.260
SRR5643525five period of Gastrodia elata26.780
SRR5643528five period of Gastrodia elata19.790
SRR5643658five period of Gastrodia elata29.690
SRR5643659five period of Gastrodia elata22.670
SRR5643660five period of Gastrodia elata20.370
SRR5643661five period of Gastrodia elata18.980
SRR5643662five period of Gastrodia elata29.760
SRR5643663five period of Gastrodia elata31.610
SRR5643664five period of Gastrodia elata31.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.780
SRR6049655Rhizomagastrodiae_C368-T10_good_121.590
SRR6049656Rhizomagastrodiae_C368-T07_good_125.500
SRR6049657Rhizomagastrodiae_C368-T07_good_126.060
SRR6049658Rhizomagastrodiae_C368-T04_good_127.310
SRR6049659Rhizomagastrodiae_C368-T04_good_127.480
SRR6049660Rhizomagastrodiae_C368-T01_good_129.030
SRR6049661Rhizomagastrodiae_C368-T04_good_127.550
SRR6049662Rhizomagastrodiae_C368-T01_good_125.940
SRR6049663Rhizomagastrodiae_C368-T01_good_124.320
SRR6049664Rhizomagastrodiae_C368-T10_good_125.350
SRR6049665Rhizomagastrodiae_C368-T10_good_125.350
SRP279888GastroGastrodia elata tuber 26.70
JuvenJuvenile tuber16.16
Mother_GastroMother tuber of Gastrodia elata 19.42
Mother_JuvenMother tuber of Juvenile 16.68