Gene detail

Detail information of GWHGAAEX017899/evm.TU.scaffold_88.97

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|434392943\|ref\|YP_007127890.1\|	3.00E-65	folate/biopterin transporter [Gloeocapsa sp. PCC 7428]
nr	gi\|695016061\|ref\|XP_009394927.1\|	0	PREDICTED: probable folate-biopterin transporter 2 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q5FV41\|FBT2_ARATH	0	Probable folate-biopterin transporter 2
trEMBL	tr\|M0SKB7\|M0SKB7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P02000_001}
TAIR	AT5G25050	0	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000095	2806786	2819345	+

Transcript Sequence
>GWHTAAEX017899 CCTTAGAGCGTTGCCTGCCGCCGTTCCCGCCCCCGCTCCCACTCCATTTTGATAGTCGACCAGGCCAGAGTCAGGAATTATTTGCTCAAAGAATTTTCATTTTTTTTGTATATTTGGTCAGCTGCATTCACGATAGATTTGGCACTGTCTTCTTCACCTGTTTTTCCTGTGCTTCTTCTCTTCAATTTGCCTATTTTTAATCCCTTTTCCTTTGAGGGGGGTTTTAATTGTGAGTTCCTGCTTCTTTAGAATTTCTTCTTTTCAAGTTGCTACACTATTCGTGGGCTTTTAGCACTCCACAGATCTTCAAACTTTTTTCTTTCAGCAAATCCGAGGAAACCGGTGAAGCCATCCTTCCCTTGAAATTCCTGCTTCCCATTTATTTAAAGGAAAATCTTTGCTGTTTGTACTAGAAGAAGAACCAGCAAGAAATCCACCATTTTTTCTTCTAATGGAGTCGTATCTACCTGTTCAAATTTCTTCATCTGAACTCATCACAGAAGATGAAAAGGCGCCTATTGTGTTCACTGATGGAGTGCTAAACGAGAGCGAATCTTCTTATGAGGTTGAGTTTCTAAGTAATAGGGTTTCAAAGGCTCAACAGATTGTTTTATTTCTTTCGCCACTAGCTTGGTTTAGATTTCTTTCAAAGGAGACGCATTGGAGTTTTGTGTTTGGAGTCATTACGGTGTATGGAATCAGCCAAGGATTCGGAGGTGGAACATGGAAGGTTTCCACTGAATATTACTGGAAGGATGTGCAAAAGGTGCAGCCTTCAGCAGCACAGTTTTACCAGGGGATTATTTCGATTCCATGGATTGTAAAGCCTCTTTGGGGTATTCTTACTGATGTTCTTCCCATTGCCGGGTACCGAAGAAAGCCATATTTCATTCTTGCAGGATTTTTGGGAATATTCTCAATGCTTACCTTATCACTCTATAGCAAACTAAATGTTATGTTTGCTTTGCTGGCATTGACTGTGGGAAGCGCAAGTGCAGCTATCTCAGATGTGACTATAGATGCCTGTGTTGCACAGAACAGTATTGCTAAACCTTCACTTGCTGCGGACATGCAAAGCTTATGTGGGCTATGCTCCTCCATAGGGGCACTTATAGGCTTCTCCTTAAGTGGAATACTCATTCGTGCCATGGGATCTCAGGGGGTACTTGGCTTGTTAAGCATCCCGTATGCGCTTGTTTCTTTGGCTGGAATATTGATGATGGAGCCACGCACGACTAATTTTGCATATAATGAAGTTCACAAGAAGTTGCTGCAAGTTTGTGAATCTATGTGGTTAACTTTGAAATTCCCTCAAGTGTGGAGGTCATGCATATACATGTATATTTCATGTGCATTGACTCTAAACATTCAAGAAGGGATGTTTTATTGGTATACCAATCCTGATGCAGGCCCTTCCTTTTCTCAGGAGACCGTTGGATTTATCTTCTCAATTGGCTCAATTGGTTCTCTTTTCGGGGTCCTCCTCTACCAAAATCTTCTCAAGGACTTTCAATTCTGCAGCTTGCTTTTTTGGGCCCAACTGCTATCTGGTTGTGCAGGAATGCTGGATTTGATGCTGGTTCTTCGCCTGAACCTGAAACTCGGTATTCCCGACTATTTCTTTGTGGTAGTCGATGAGTGTGTTTCCCAGATGATTCTGCGCATCAAGTGGATGCCACTTCTTGTGCTGAGTTCCAAGCTTTGTCCCGCTGGAATCGAAGGCACCTTTTTTGCATTGCTTATGTCCATTGATAATGCTGGCTCGCTCTCATCGTCATGGGGTGGCGGACTTGTGCTTCATCTCTTAAGGGTCACGCGCACTGAATTCAGCAATCTTTGGGTTGCAATCTTGATCCGCAACACATTGAGAATAATTCCTTTGGCTCTGTTATTTCTGGTTCCCAAAAGCAGTCAGGATTCAAATATTCTTCCTCCTGAGATGCTTGTGGAAAATGAAAGCACAAACAGTTCTAAAGAAGCAGATGTTGAATTGGCATCTCTGGTCAGAAGCACTTAGTCGGGTGTGTATGTTTTCTCTTTTTTGGTATCAGCAGCTGCGATTTAGTTTACAGAGCCCTTTGATGCACTGTAATAGTGCTACAGGAAACTAGATCAGCTGCAGGAACAGTAACTGCTCTTTATCATTTGAGCACCTCAGTTCAATATTTTTCAGTGCAAACCTCCTACAAGTTTTCCCTGCTGAGCATCTCGGTAGGATGATAGCTTCTTGGAAAATACAAAACATATACTTGGAATGCAAATTTTTTATTTATAATTCTTGTTGAAAAGCCTCATCTTTTGATGGATAAACATGATGCATGTTTCAAATATGGCATGGCGTTCCACTTTGCTGCTCTATTATAATGTTTTAATCTTTTCTTTTGTATTTTTTTTTTCACTTTGCATGATTGATTGTAGTGTTTGTTGGTGAAGAAATGAAATATCAGTTTTC

Network for GWHGAAEX017899

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03092.15	BT1	85	247	3.80E-37
PF03092.15	BT1	276	485	5.40E-53

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	14.090
SRP064423	SRR2545915	Juvenile tuber	16.430
SRP108465	SRR5643513	five period of Gastrodia elata	7.070
	SRR5643514	five period of Gastrodia elata	6.160
	SRR5643515	five period of Gastrodia elata	9.930
	SRR5643524	five period of Gastrodia elata	6.160
	SRR5643525	five period of Gastrodia elata	8.120
	SRR5643528	five period of Gastrodia elata	5.600
	SRR5643658	five period of Gastrodia elata	7.310
	SRR5643659	five period of Gastrodia elata	10.500
	SRR5643660	five period of Gastrodia elata	10.040
	SRR5643661	five period of Gastrodia elata	9.300
	SRR5643662	five period of Gastrodia elata	9.400
	SRR5643663	five period of Gastrodia elata	9.470
	SRR5643664	five period of Gastrodia elata	7.630
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.820
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.460
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.380
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.280
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.120
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	15.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.350
SRP279888	Gastro	Gastrodia elata tuber	7.38
	Juven	Juvenile tuber	4.48
	Mother_Gastro	Mother tuber of Gastrodia elata	7.90
	Mother_Juven	Mother tuber of Juvenile	4.26