Detail information of GWHGAAEX017908/evm.TU.scaffold_88.107
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|212639157|ref|YP_002315677.1| | 5.00E-56 | glutathione peroxidase [Anoxybacillus flavithermus WK1] |
| KOG | KOG1651 | 1.00E-105 | Glutathione peroxidase |
| nr | gi|743866303|ref|XP_010905030.1| | 1.45E-118 | PREDICTED: phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic-like [Elaeis guineensis] |
| Swissprot | tr|P52032|GPX1_ARATH | 4.00E-106 | Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic (Precursor) |
| trEMBL | tr|M0T1A1|M0T1A1_MUSAM | 1.00E-112 | Glutathione peroxidase {ECO:0000256|RuleBase:RU000499} |
| TAIR | AT2G25080 | 1.00E-105 | glutathione peroxidase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000095 | 3161658 | 3192960 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017908
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00255.18 | GSHPx | 87 | 195 | 9.70E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00432 | gpx, btuE, bsaA | Metabolic pathways | map01100 |
| Arachidonic acid metabolism | map00590 | ||
| Glutathione metabolism | map00480 | ||
| Thyroid hormone synthesis | map04918 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0004602 | Molecular Function | glutathione peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 58.820 |
| SRR2545915 | Juvenile tuber | 53.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 45.300 |
| SRR5643514 | five period of Gastrodia elata | 42.640 | |
| SRR5643515 | five period of Gastrodia elata | 45.320 | |
| SRR5643524 | five period of Gastrodia elata | 42.130 | |
| SRR5643525 | five period of Gastrodia elata | 77.370 | |
| SRR5643528 | five period of Gastrodia elata | 75.580 | |
| SRR5643658 | five period of Gastrodia elata | 98.500 | |
| SRR5643659 | five period of Gastrodia elata | 40.980 | |
| SRR5643660 | five period of Gastrodia elata | 41.640 | |
| SRR5643661 | five period of Gastrodia elata | 47.810 | |
| SRR5643662 | five period of Gastrodia elata | 68.220 | |
| SRR5643663 | five period of Gastrodia elata | 69.720 | |
| SRR5643664 | five period of Gastrodia elata | 69.300 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 45.260 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 78.650 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.160 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 50.660 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 56.850 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 51.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 49.150 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 54.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 42.510 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 41.220 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 46.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 46.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 90.25 |
| Juven | Juvenile tuber | 55.14 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 58.36 | |
| Mother_Juven | Mother tuber of Juvenile | 49.68 |