Detail information of GWHGAAEX017917/evm.TU.scaffold_88.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26750Adenylate cyclase-associated protein (CAP/Srv2p)
nrgi|743837040|ref|XP_010936278.1|0PREDICTED: cyclase-associated protein 1 [Elaeis guineensis]
Swissprottr|O65902|ACAP1_ARATH0Cyclase-associated protein 1
trEMBLtr|V4RPZ5|V4RPZ5_9ROSI0Adenylyl cyclase-associated protein {ECO:0000256|RuleBase:RU000647}
TAIRAT4G344900cyclase associated protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009534062463454034+
Transcript Sequence

Network for GWHGAAEX017917

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01213.18CAP_N233283.30E-70
PF08603.10CAP_C3495062.80E-58
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007010Biological Processcytoskeleton organization
GO:0000902Biological Processcell morphogenesis
GO:0003779Molecular Functionactin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.830
SRR2545915Juvenile tuber46.900
SRP108465SRR5643513five period of Gastrodia elata63.580
SRR5643514five period of Gastrodia elata70.630
SRR5643515five period of Gastrodia elata62.020
SRR5643524five period of Gastrodia elata73.370
SRR5643525five period of Gastrodia elata50.040
SRR5643528five period of Gastrodia elata69.840
SRR5643658five period of Gastrodia elata60.790
SRR5643659five period of Gastrodia elata47.840
SRR5643660five period of Gastrodia elata44.960
SRR5643661five period of Gastrodia elata45.180
SRR5643662five period of Gastrodia elata40.000
SRR5643663five period of Gastrodia elata47.030
SRR5643664five period of Gastrodia elata40.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.210
SRR6049655Rhizomagastrodiae_C368-T10_good_161.790
SRR6049656Rhizomagastrodiae_C368-T07_good_164.840
SRR6049657Rhizomagastrodiae_C368-T07_good_141.220
SRR6049658Rhizomagastrodiae_C368-T04_good_149.010
SRR6049659Rhizomagastrodiae_C368-T04_good_143.250
SRR6049660Rhizomagastrodiae_C368-T01_good_150.430
SRR6049661Rhizomagastrodiae_C368-T04_good_143.110
SRR6049662Rhizomagastrodiae_C368-T01_good_174.210
SRR6049663Rhizomagastrodiae_C368-T01_good_166.090
SRR6049664Rhizomagastrodiae_C368-T10_good_190.940
SRR6049665Rhizomagastrodiae_C368-T10_good_190.940
SRP279888GastroGastrodia elata tuber 54.42
JuvenJuvenile tuber106.33
Mother_GastroMother tuber of Gastrodia elata 73.98
Mother_JuvenMother tuber of Juvenile 102.62