Detail information of GWHGAAEX017919/evm.TU.scaffold_88.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00486.00E-87Transcription factor, Myb superfamily
nrgi|743767706|ref|XP_010914123.1|1.78E-97PREDICTED: transcription factor MYB46-like isoform X1 [Elaeis guineensis]
Swissprottr|Q9M2Y9|RAX3_ARATH2.00E-76Transcription factor RAX3
trEMBLtr|M0T3D3|M0T3D3_MUSAM2.00E-96Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P01850_001}
TAIRAT5G576206.00E-87myb domain protein 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009534815553482840-
Transcript Sequence

Network for GWHGAAEX017919

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding14624.80E-15
PF00249.30Myb_DNA-binding691114.20E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.290
SRR2545915Juvenile tuber3.330
SRP108465SRR5643513five period of Gastrodia elata19.670
SRR5643514five period of Gastrodia elata23.050
SRR5643515five period of Gastrodia elata15.000
SRR5643524five period of Gastrodia elata18.770
SRR5643525five period of Gastrodia elata1.760
SRR5643528five period of Gastrodia elata1.180
SRR5643658five period of Gastrodia elata1.600
SRR5643659five period of Gastrodia elata1.020
SRR5643660five period of Gastrodia elata1.040
SRR5643661five period of Gastrodia elata0.990
SRR5643662five period of Gastrodia elata1.320
SRR5643663five period of Gastrodia elata0.530
SRR5643664five period of Gastrodia elata0.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.200
SRR6049655Rhizomagastrodiae_C368-T10_good_123.770
SRR6049656Rhizomagastrodiae_C368-T07_good_113.380
SRR6049657Rhizomagastrodiae_C368-T07_good_112.270
SRR6049658Rhizomagastrodiae_C368-T04_good_112.140
SRR6049659Rhizomagastrodiae_C368-T04_good_112.750
SRR6049660Rhizomagastrodiae_C368-T01_good_18.970
SRR6049661Rhizomagastrodiae_C368-T04_good_19.250
SRR6049662Rhizomagastrodiae_C368-T01_good_114.720
SRR6049663Rhizomagastrodiae_C368-T01_good_112.300
SRR6049664Rhizomagastrodiae_C368-T10_good_122.280
SRR6049665Rhizomagastrodiae_C368-T10_good_122.280
SRP279888GastroGastrodia elata tuber 0.87
JuvenJuvenile tuber1.53
Mother_GastroMother tuber of Gastrodia elata 153.70
Mother_JuvenMother tuber of Juvenile 207.67