Detail information of GWHGAAEX017930/evm.TU.scaffold_88.132
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG2287 | 8.00E-102 | Galactosyltransferases |
| nr | gi|743767736|ref|XP_010914138.1| | 8.61E-137 | PREDICTED: beta-1,3-galactosyltransferase pvg3-like [Elaeis guineensis] |
| Swissprot | tr|A7XDQ9|B3GTK_ARATH | 3.00E-06 | Probable beta-1,3-galactosyltransferase 20 |
| trEMBL | tr|J3LHS2|J3LHS2_ORYBR | 2.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:OB02G41890.1} |
| TAIR | AT5G57500 | 8.00E-102 | Galactosyltransferase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000095 | 3892904 | 3894021 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017930
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01762.20 | Galactosyl_T | 99 | 183 | 1.20E-06 |
| PF01762.20 | Galactosyl_T | 201 | 246 | 5.40E-05 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006486 | Biological Process | protein glycosylation |
| GO:0008378 | Molecular Function | galactosyltransferase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.120 |
| SRR2545915 | Juvenile tuber | 0.420 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.150 | |
| SRR5643524 | five period of Gastrodia elata | 0.130 | |
| SRR5643525 | five period of Gastrodia elata | 1.540 | |
| SRR5643528 | five period of Gastrodia elata | 0.240 | |
| SRR5643658 | five period of Gastrodia elata | 2.020 | |
| SRR5643659 | five period of Gastrodia elata | 0.000 | |
| SRR5643660 | five period of Gastrodia elata | 0.140 | |
| SRR5643661 | five period of Gastrodia elata | 0.000 | |
| SRR5643662 | five period of Gastrodia elata | 0.000 | |
| SRR5643663 | five period of Gastrodia elata | 0.000 | |
| SRR5643664 | five period of Gastrodia elata | 0.260 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.210 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.630 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.290 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1.670 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 1.570 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.480 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.110 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 0.360 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 0.360 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.15 |
| Juven | Juvenile tuber | 0.00 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.93 | |
| Mother_Juven | Mother tuber of Juvenile | 0.04 |