Gene detail

Detail information of GWHGAAEX017932/evm.TU.scaffold_88.135

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000095	3979096	3982674	-

Transcript Sequence
>GWHTAAEX017932 GTATATAGGCTCCATTTTGCTTAAAATAATTCATCAAGTGCAGTAATAAATTTTTACATATATTCCTTCTTAAAAATGTACATAGAATATTTTTGTTTGTTATATTATTATTAATTTTTTTTGACAGAGAATATTTTATTTCTTATTTCTTATGGTTTATCCCAAATAACAAGAAGAGTCTCTTGATGATTCTAAAACTAGCAGCAGCTGTTGATGCTAAGCCACGTCAATTTGGGCCCACCATTGCTTTTATTTTTGCTGGTCATTAGATGTTTTTATGGCTTAAGCTTGAGTTAAGAATTTAAATCCGGTAGCTTAAGAATTTAAATCCGGTTTTGAGGCTCAGCTTCTTCCAAGTGAAAAAAATAGCTTTTACTCGAAAGCCTATGATCGAGCTGCAGCCATGATATTTTAACAGAGGCGAAATCTGGCGTTCTGGGTGCGAGCGAGGCAAAGTTGTAAATATATGGAGAAGAGTAGAAATTCGTGAGGGCTCATTCACAAATAATATTGATGACTGTAAGAGTATTTAAGCGTACAAAATACAAAGATATGAAAGCACTAAAATGCTACTCTTGAAATGAAGTAATCTGTATAGTTTTGATTAATTTATGGGTACAATCATTCACAGATTAAAGGCTGATTATATTAGTATTTAATTTATCAATTAAAGTTATTCTATATACTTTTGTAGAAATTCAATGATTTTTTAAGCTTGTCAATATCATGTAGTCTATTAAAAAGACCAATTGGAATTAAATAAGCATAAAAATTAAGCATATTAATCGTTTGCTATTAAAGTAATCAAATCGAATATCAAGTAACAATCTGAAATAATAAGAGAATATTATAAAAAATATATCTATTAATAATTATTGACTACTATCATATAAAAACAGAATTAGATTTTTTAAAAGCACATCTTGACTAAAATTTAAACAATAAGAAAAAAATTTATGATGTTACATCTTGACTGAAATTTTTAATTCGTCCATACTTTTTTTTCAAATAACGAACGGTGAAGTTTTTGATAAAAATTTTAAAGTTAAGTATGTTAGAGTGGGAACACTCACTAAATAAGAAGTTATCTGACAAAATTGTAATTTCTTTGGGGCCAAAATTAATAATACTATGATGCTTTTTAATATGGATCTTACATGTTGCAACTCCCTTTATTTCCATCGTAGGATCAAACCGTATGTGTAGGAAGTGCCGCATCTGTATTCTCCGAGCCATATATTTCACTCGATATTTCCCTGTTCCTACAATTGAATACAATGTTTTCCTCTTGCCTTTCTCGTGTTTTCATCCTCATTCGTCTCCGATATAGCGTGAAGAGCGAAGATTGGCGGCGCAAACGTGAAAGAACGACAGGCTTCGTGAAGGGCTCGACTCTGCTCGACGAAGGGCTTGGCTCAGAGATAGCTCGACGACAGGCTCGGCTCAGTGAAGGGCAACGCAAGCATGAAGGACGAAGGGCCAAATCGTCTGCGACTTCGAATCGGATCTCCGATTCGTCTGTAAATCGAATGGAATGCGAGTGGTGTCCATTCGTTGGCCGGAGGCTTAGGATTTTGCGAACGACGGCGAGCAGCTAGCCAAGACATCGAAACAAAGGAGATAATGTTCGTCGCGGGATTTAGAATTCGCTAGGGTAACAATTTTACAACGTGATATTTATACTGTTGTAAATTGTTTTCCTCTTGTTTTACCCCTAAATTATTAGCAAACCAAATACTTGAAATTTAAAATTCAGGTAAGAAGATTGGTTTACCCTCACTTTTGCATTCAAAACAACCCTTCAGCATAAACATGTTTTTTTTCTTATTATTGTGAGGGCTTAGCCCAAACTGAATAAAAGGAAATGTAGATATAAATGCTTAAACAATCAGTATAAGAAAGAAAAAAAAGCATGGTATTGACGCTATAATACTAAAAGCAGAAAAACCTTAGAACGAAAACAATGATAGGCAAATATATATATATATATACACGAGTTCAGGTTGAGTTCAACAATTAGCAACCCTGTTTGATAATGTTGATCTCCCACCATAAACCGATGCGATGAAGATAGCTGAAGGTGCATTTCCTGGAGCTGCTCCATCGACAGAAGCAGATGCCAGACCATAGGGTCGTGAAGCAAGCCAATGCCCAGGATAGAGTACAGCATAATGAATGAAACAAAGTTCGCATAACAACAGAAAAATTGCCAATACAAAGACAATGAAACTTCCAAGAGCAGTATCCAAGCATCAACATAATGTAATCATAGAGGTCACTAGTTGAAGTGCAGTCTTTGAAAATGAAGTTAATGGCATATTCTGAACAGTAGATTGCAGCAGCTCCTTATGACAAAACGCTTTGAGCAAAGAGGCTGAGAAGAACCCAATAAAACCACAATTTTCAGCAATAACACCATGATTAGGAGAGGACTTAAATCAGTTCAGATAAATGCAGATTTATAAGAGAGACCTTTCTCAATTATTAAAGCTAAATAATATCAGCATTTATATTTGTAGGAGTCCAATGTTAAATGACTTCTGTAATCGTTCTTTTGCATTGGATGTTTAATTGGCTCTCAGATTTGAATTGTTAGAGAAGAGTTACATTTCGTTCCTCTTAACCATGCTTTACCCATTTATCCATACAAAAATCTGCATTCTAAAGTGCTTAAAAGCGATTTGCGGGTAGGAGAAATATAACACTTTTATGCAAAATATTCCTAAATAAGTAGAAGATGTACATACAGGAGAAGAATAATAAATGATCATGAAATTCATTAACTGCATTGTAAAGGACACAACTAGTAGTGATGTTAATTCATTTTGCATTTAGAACAACAACCATTTTTGCAACCCTTACTAGTTGCTCTCCATAGGAAACATGAATATCTTAATTTATGCTTTTTGTGCCAAATGAGATTAACCAAATCCACTAATGGATCAATGCTATGATTCAAATTGTGAGCATCTTTAAAAGTAGAGGAGTCCATGCCTTTGAACCTAACTTTACCATTAGAGGTTACATGATCAGGTTTTATGAGATTAATAGATTGTAGAAATATCTTTTTGAAGCGAGATATCTTCCCCAAGAGATTTGGATCCTCGTATAAGAGATTATTTGATTTCCACCACTTTGTGAGCTTAGATATATTAGTGCTAAGATGTGGAGACCATTTAGATCATCATGGAGGTGCTAATGAGCTCCGATGACTATCTGAGAGGTTCTGAGGTGATACGGGATAAGTTGGAGAAGTCCAGACTCTGTAGCGTACCGTGACCAGCATCTAGAGACTGGGGCGTTGTGGCGCGCCCTGGCACCAAACCAGCCAGAGATTGGGGCGACGTAGTGTACTGTAGCGCGCCGTGGCACCCAGCTAGCCAGAAACTGGGGCGCTATAACACGCCTCAGTGCCAGACTAGCCAGAAACTGGGGCGCTACAGCGCGCCCTGGCGCCAACCAGGGCGCCTCAGTTCTGGGAAGAAAAGAAGTTGATCGGTAAGCTGTGCATGCAGTAGATCCTTTTTGTTCTTGTGAATGTAAATCTTTCTATAATTCTGTAATCTTCTTGATTCATAG

Network for GWHGAAEX017932

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.640
SRP064423	SRR2545915	Juvenile tuber	1.410
SRP108465	SRR5643513	five period of Gastrodia elata	1.880
	SRR5643514	five period of Gastrodia elata	1.490
	SRR5643515	five period of Gastrodia elata	6.500
	SRR5643524	five period of Gastrodia elata	1.630
	SRR5643525	five period of Gastrodia elata	2.290
	SRR5643528	five period of Gastrodia elata	1.560
	SRR5643658	five period of Gastrodia elata	1.380
	SRR5643659	five period of Gastrodia elata	3.080
	SRR5643660	five period of Gastrodia elata	2.270
	SRR5643661	five period of Gastrodia elata	1.550
	SRR5643662	five period of Gastrodia elata	6.880
	SRR5643663	five period of Gastrodia elata	5.010
	SRR5643664	five period of Gastrodia elata	9.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.150
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.330
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.590
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.940
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.550
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	2.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.760
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.760
SRP279888	Gastro	Gastrodia elata tuber	4.05
	Juven	Juvenile tuber	0.55
	Mother_Gastro	Mother tuber of Gastrodia elata	1.63
	Mother_Juven	Mother tuber of Juvenile	1.04