Detail information of GWHGAAEX017935/evm.TU.scaffold_88.140
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|269128919|ref|YP_003302289.1| | 8.00E-25 | serine/threonine protein kinase [Thermomonospora curvata DSM 43183] |
| KOG | KOG1187 | 3.00E-79 | Serine/threonine protein kinase |
| nr | gi|743768063|ref|XP_010914306.1| | 0 | PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Elaeis guineensis] |
| Swissprot | tr|Q8RWZ5|SD25_ARATH | 2.00E-77 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (Precursor) |
| trEMBL | tr|A2XYF5|A2XYF5_ORYSI | 3.00E-164 | Putative uncharacterized protein {ECO:0000313|EMBL:EAY95865.1} |
| TAIR | AT1G66980_2 | 3.00E-79 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000095 | 4057048 | 4062213 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017935
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 121 | 387 | 8.90E-42 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-Os |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.630 |
| SRR2545915 | Juvenile tuber | 11.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 16.560 |
| SRR5643514 | five period of Gastrodia elata | 9.440 | |
| SRR5643515 | five period of Gastrodia elata | 22.540 | |
| SRR5643524 | five period of Gastrodia elata | 17.280 | |
| SRR5643525 | five period of Gastrodia elata | 34.220 | |
| SRR5643528 | five period of Gastrodia elata | 51.600 | |
| SRR5643658 | five period of Gastrodia elata | 20.560 | |
| SRR5643659 | five period of Gastrodia elata | 30.890 | |
| SRR5643660 | five period of Gastrodia elata | 33.390 | |
| SRR5643661 | five period of Gastrodia elata | 36.140 | |
| SRR5643662 | five period of Gastrodia elata | 37.040 | |
| SRR5643663 | five period of Gastrodia elata | 22.890 | |
| SRR5643664 | five period of Gastrodia elata | 41.800 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.110 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.580 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 8.130 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.240 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.180 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.610 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 14.170 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.480 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 6.110 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.390 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.390 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 30.12 |
| Juven | Juvenile tuber | 22.15 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 130.43 | |
| Mother_Juven | Mother tuber of Juvenile | 99.45 |