Gene detail

Detail information of GWHGAAEX017948/evm.TU.scaffold_89.5

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4280	3.00E-100	Kinesin-like protein
nr	gi\|743883978\|ref\|XP_010909556.1\|	0	PREDICTED: kinesin-like protein KIN12B [Elaeis guineensis]
Swissprot	tr\|Q8L7Y8\|KN12B_ARATH	2.00E-109	Kinesin-like protein KIN12B
trEMBL	tr\|M0RJC6\|M0RJC6_MUSAM	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G23670_1	3.00E-100	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000090	234633	251637	+

Transcript Sequence
>GWHTAAEX017948 GTCGGGATCAATATAAGAAAGTAGCGCAAGCGCCGGACGTCTCTGTGTTTCCGCTATCAATTCTTCTTCATTTTACGGATGCCAAGGGTTTTTCCTATTATAATAATGTTCCGGCGGAACAGCATACCTATGCTTCGCTGTTTCAGAATTCGAAATGCAGCGCTTTAATATTTTGCCTTTTTCTTATTTATAATCTCTCATATCTTCTTCCACTCTCGCACTAAACAGCTCTCTGACAAACTTGGGGTTGGCTCTCTGCAGCTCCATAATCAATGGAACCCCTACACAGCCTAACTCCTTCGTCCAGATCGATCTCTCCTCTTGCTCGTCGATCCATCTCCGTCAGTGGCTGCAAAAAGAGTTCCGTTCTTGCGGATTCAAGATCCGACCAGGAAAACACTCCGCCTATCAATCCAAATGTACAAATCCACGGCGTATCCTCAGCCTTGGCTCATGAGAAGACATCTAATCAGCGATTAGCTCCTATTGCTGCAGAAAAGCCTTCTATAAATGTCCCGAAAGATGGATCTGCATATCTTTTGAATCATTCAGTCAAGGTTATTGTGAGAATAAGACCAGAGCAGGAGGAAGGTAGCCCACGAATTGTTCAAAGAATTGCCTTTGATACCTTGTCAATAGGCGATCGAAAGTACTCTTTTGATTCTATCCTTGATTCAGGGTCATCTCAGGAAGATGTTTTCAAATTAATTGGAGTGCCTCTGGTGAAAAGTTCTTTGGCTGGTTTCAACAATTCCTTAGTATCTTATGGACAATCAGGAACTGGAAAGACCTACACGATGTGGGGCCCACCTAGCGCAATGGTTGACAGCACACGCACAAATCACTCCCAAGGCATTGTGCCTCGCATCTTCAAGATGCTGTTTTCTGAGATCTGCAAACATTCGGAAGAAAGCTCTGATGATACATGGACCAAATATCAATGTCGGTGTTCTTTTTTTGAGATATACAATGAGCAGATTATTGATCTGCTTGATCAAAGTCAAAGCAACTTTCTGAGAAGCAATGAGGCCAGAAATGCTTTCCAGATTGAAAATTTAAGTGAAGACTATGTCAACACAATGGAGGATGTCACGCAACTTTTGGTGAAGGGACTTTCTAACAGAAAAGTTGGCGCAACATGTGTAAACTCGAAGAGTTCACGTTCACATGTAATATTTACTTGCATAATTGAATCTTGGTGCAAGGGTGTATCATCAAATGAATTCAGCAGCTCAAAGACTAGCAGATTAATCTTTGCTGACCTTGCCGGAACTGGCAACTGTAACGTTGATGGGTTTCCGAGACAAACACTTCGGGAACATAGATTTATTAAAAATTCAATTTCAAAACTTGGGAGATTGGTCAACATTTTATCAGGTTTCGCTCATCAGGAAGATGGTGCAAATGTTCCCTATGGGGACTCCTGTTTAACTAACGTATTGCAAGAAACTCTTGGAGGGAATACCAAGGCTACATTTATCTGCACCATTTTTCCGGATGAAAGATATAAAGCAAGAACACTGAGCACGATAAGATTTGGAGAAATGGCAAGACAAATGAAAAACATGGCAGTGATTAATGAAATATCTGAAGATGCCGTCAATGATCTGAGCGCCCAGATACGTCAGCTGAAGGAAGAACTTGTAAGAGCAAAATCTTGTGGAAGTAGCTGTGCTGTTAATACGGATGGATTCTTCAAGAGGCATAATGCCCGCGAGAGCTTAAATGCTCTGAAATGGAGCCTGAATCGTTCTTTGAATCTGCCTTCGATGGATGTTGATAATCATCCAGAAGTTGAAATGGATGTTGATGTCGAACAACATTTAAAGGAATTGTGTGTTCAGCTCAATAACTTGAATTTCCCTATGGAAGAACAAGAAGTTCAAACCTTGATTACAGAGGATTCCATTTCCAATTTGTCATCAGATCAAGAACTAGAACTCAGTGCGAATAAAAATTGCAGCAGCGTAAATGATCTTAACACCGATAGTTTCTCATTTCCAATGGACAATGAGTTGGACAAAGAGTTTTCTAAAGTGCAGGAACTTGGGAGCCCCAATTCATTGAAGGGAATGCTTATGGAGAGCAAGCAATCCCCAGTACTTGAAGAGCCGCAGGCTTGTGCGTCACCTAAAGATGTTGATTGCTCGAAGAGAGCAACTTTGAAGAAGATTGATTTAGAAAGCCCAAAACTTGGTAAGGTAGAGCCTATTCGTTCCTCAATGAAATCAAGTAAAATCAACCCCATTGAGTCTTTGGCGGCTAGCCTTCAAAGAGGCTTGGAGATTATTGATTACCATCAGCGGAATTCATCTACTGAACATAAATCACCTGTTGCTCTTTCATTAGAGCATTTGTCTTCGATCTCACATCCGTCAGACAGGAAAAAAGTTGATGCTTGTGATCAAACATCACCAAAGCATGTAAATGCTCCTCCTGTCCTGTGTTCAGCTTGCAATCAACCGGCGGTGACTGCTAATATGAAAAAACAGACTAATCAAGCTGCACCTCCCAGAGAACTAAACAACGCATCGGAATCTGGAATCAAGGTTTTGGAAGATGTCAGCCTGAGAAACATTGAGCTTGAGGCTTTATGCACAGAACAAGCGATGATTATAAAAAAACTATATTCTCAGAACGATATGCCGCAAAATTCAAAATCGGAACAGAATCCTTCTGTGGCCATTGAATCCTCCAAGAACGATGAAAATGCTGTTACTGAATTCTGCGGTTCTGAAGCCGGCGACTCACTGCTTGAGCAGATCAGAAACGGCAGCAGCCCACATTTTGAGAGGGAGAAGGAGCGGTGGATGGAATCAGAGAGCAGGTGGATATCCCTAACCGAAGAGCTGAGGATTGACCTTGAATCGAACCGGAGGATCACAGAGATAAAGGAACTGGAGCTGATGCACGAAAAGCAGTGCACGGCTGAGCTGGACGATGCGCTGCGTCGCTCCATCTGGGGGCACGCTCGGATGATCGAGCACTACGCTGATCTTCAGGAAAAGCACGAGGAACTGATCGCCAAGCACAGGAAAGTCATGGAGGCCATTGCGGAGGTGAAGGAAGCTGCAGCCAGAGCAGGAACCAAGCACAGAGGATCCGCCGCTTTTGCCGCCGCCCTAGAGGATCAGCTTTCGTTTTCTAGAATCGAGAGGGAGAGGGAAAGAGCTTGCCTAAGGGACCAGAACCGGATCCTTAAGCTCCAGCTTAGGGATACTGCCGAGGCTGTTCAGGCCGCGGGAGAGCTGCTCGTGCGTCTGAAAGAAGCCGAAGAAGCCCTTTCTATCACAGAGGAGAAGTATGGCCAAGCGCAACAAGAAGTAGAGAAGCTGAGGAGGCAGTTGGAGAAATTGAAGAAGAAGCACAGCAATGAGATTGCTACGATGAAGTATTACCTGGCAGATAGCAGGCTGCCGGAATCTGCTTTAGAGCCGCTCTACCAGCAGCAGCAGCATGATTTTGATGGCGGCGCTGATCAGAGCGGGACGAGGCCGTTGTCTGAAGACATGTCCTGGAGGTCTGCATTCAAGCCTTTCTATCAGCCAGCAGAAAAAGAGTATTCGCCTGAAGCGATTTCAGATTTGTAGTATTCATCAGTTTCATCGTATGCTTTGGCAGTAAGTGAATTCTCACTCTTAAATATGTTATGGTGCTAATTGTTTTAAGCACCCACAAATCTGAATGAATGATAAAAGGCCACCCTGTGATGTAACTAATTGGTTGCTAAAGTATATTGGATCATTCCCTATAAACACCCACATTGACTTAGAACGTCAGTGGTATTGATAAGAACAGATCTTATACGGTTGCTTTTTTAGATTGTCAGTTTTTGTAATAGATTTTAATCTCTACAATTTTAGTTGACATTCTCCGAAGGCAATATAATAAAAACTATTCGCTATTCTTGTATGAAGAACTTCGCTTGGTGTTGCATTGATCAGCATTCTTATTTTGGTGTTTTTATAACATAGATATTGAGAAAATTTGCTTACTTTGGTCAATTATTGTAACGGTTTCTAATCTCAACGATTTTGTTCGGTATTCTCCAATGATATT

Network for GWHGAAEX017948

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	121	428	1.50E-75

Protein Sequence

>GWHPAAEX017948
MEPLHSLTPSSRSISPLARRSISVSGCKKSSVLADSRSDQENTPPINPNVQIHGVSSALAHEKTSNQRLAPIAAEKPSINVPKDGSAYLLNHSVKVIVRIRPEQEEGSPRIVQRIAFDTLSIGDRKYSFDSILDSGSSQEDVFKLIGVPLVKSSLAGFNNSLVSYGQSGTGKTYTMWGPPSAMVDSTRTNHSQGIVPRIFKMLFSEICKHSEESSDDTWTKYQCRCSFFEIYNEQIIDLLDQSQSNFLRSNEARNAFQIENLSEDYVNTMEDVTQLLVKGLSNRKVGATCVNSKSSRSHVIFTCIIESWCKGVSSNEFSSSKTSRLIFADLAGTGNCNVDGFPRQTLREHRFIKNSISKLGRLVNILSGFAHQEDGANVPYGDSCLTNVLQETLGGNTKATFICTIFPDERYKARTLSTIRFGEMARQMKNMAVINEISEDAVNDLSAQIRQLKEELVRAKSCGSSCAVNTDGFFKRHNARESLNALKWSLNRSLNLPSMDVDNHPEVEMDVDVEQHLKELCVQLNNLNFPMEEQEVQTLITEDSISNLSSDQELELSANKNCSSVNDLNTDSFSFPMDNELDKEFSKVQELGSPNSLKGMLMESKQSPVLEEPQACASPKDVDCSKRATLKKIDLESPKLGKVEPIRSSMKSSKINPIESLAASLQRGLEIIDYHQRNSSTEHKSPVALSLEHLSSISHPSDRKKVDACDQTSPKHVNAPPVLCSACNQPAVTANMKKQTNQAAPPRELNNASESGIKVLEDVSLRNIELEALCTEQAMIIKKLYSQNDMPQNSKSEQNPSVAIESSKNDENAVTEFCGSEAGDSLLEQIRNGSSPHFEREKERWMESESRWISLTEELRIDLESNRRITEIKELELMHEKQCTAELDDALRRSIWGHARMIEHYADLQEKHEELIAKHRKVMEAIAEVKEAAARAGTKHRGSAAFAAALEDQLSFSRIERERERACLRDQNRILKLQLRDTAEAVQAAGELLVRLKEAEEALSITEEKYGQAQQEVEKLRRQLEKLKKKHSNEIATMKYYLADSRLPESALEPLYQQQQHDFDGGADQSGTRPLSEDMSWRSAFKPFYQPAEKEYSPEAISDL

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0008017	Molecular Function	microtubule binding
GO:0003777	Molecular Function	microtubule motor activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.880
SRP064423	SRR2545915	Juvenile tuber	2.910
SRP108465	SRR5643513	five period of Gastrodia elata	33.190
	SRR5643514	five period of Gastrodia elata	28.300
	SRR5643515	five period of Gastrodia elata	29.210
	SRR5643524	five period of Gastrodia elata	30.030
	SRR5643525	five period of Gastrodia elata	33.440
	SRR5643528	five period of Gastrodia elata	28.950
	SRR5643658	five period of Gastrodia elata	31.840
	SRR5643659	five period of Gastrodia elata	34.870
	SRR5643660	five period of Gastrodia elata	40.440
	SRR5643661	five period of Gastrodia elata	37.140
	SRR5643662	five period of Gastrodia elata	35.320
	SRR5643663	five period of Gastrodia elata	34.150
	SRR5643664	five period of Gastrodia elata	33.570
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.200
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.260
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.900
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.880
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.370
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	20.800
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	20.800
SRP279888	Gastro	Gastrodia elata tuber	28.32
	Juven	Juvenile tuber	38.54
	Mother_Gastro	Mother tuber of Gastrodia elata	32.69
	Mother_Juven	Mother tuber of Juvenile	49.03