Detail information of GWHGAAEX017950/evm.TU.scaffold_89.7
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|226226329|ref|YP_002760435.1| | 4.00E-20 | putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27] |
| KOG | KOG0610 | 0 | Putative serine/threonine protein kinase |
| nr | gi|595841947|ref|XP_007208313.1| | 0 | hypothetical protein PRUPE_ppa003043mg [Prunus persica] |
| Swissprot | tr|Q0DCT8|G11A_ORYSJ | 0 | Protein kinase G11A |
| trEMBL | tr|M5W6Z9|M5W6Z9_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ09512.1} |
| TAIR | AT5G47750 | 0 | D6 protein kinase like 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000090 | 385076 | 399334 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017950
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 155 | 301 | 2.40E-39 |
| PF00069.24 | Pkinase | 376 | 479 | 3.20E-21 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | AGC_RSK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.980 |
| SRR2545915 | Juvenile tuber | 3.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.570 |
| SRR5643514 | five period of Gastrodia elata | 3.560 | |
| SRR5643515 | five period of Gastrodia elata | 5.720 | |
| SRR5643524 | five period of Gastrodia elata | 4.960 | |
| SRR5643525 | five period of Gastrodia elata | 11.070 | |
| SRR5643528 | five period of Gastrodia elata | 9.580 | |
| SRR5643658 | five period of Gastrodia elata | 10.230 | |
| SRR5643659 | five period of Gastrodia elata | 3.810 | |
| SRR5643660 | five period of Gastrodia elata | 3.710 | |
| SRR5643661 | five period of Gastrodia elata | 3.350 | |
| SRR5643662 | five period of Gastrodia elata | 3.670 | |
| SRR5643663 | five period of Gastrodia elata | 3.420 | |
| SRR5643664 | five period of Gastrodia elata | 3.080 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.080 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.390 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 1.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.670 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.000 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 2.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 2.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.01 |
| Juven | Juvenile tuber | 9.79 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.98 | |
| Mother_Juven | Mother tuber of Juvenile | 20.14 |