Gene detail

Detail information of GWHGAAEX017957/evm.TU.scaffold_89.24

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672142318\|ref\|XP_008795017.1\|	2.90E-78	PREDICTED: uncharacterized protein LOC103710877 isoform X5 [Phoenix dactylifera]
trEMBL	tr\|D7TV74\|D7TV74_VITVI	2.00E-25	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI34399.3}
TAIR	AT1G64050	6.00E-13	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000090	1916190	1922379	+

Transcript Sequence
>GWHTAAEX017957 ATGGAGGCTAATGCCAACCTTAGACGTACTCCTCGATGCCTGCCCAGAATGCATGGTTCCAAGTCAGATCTCCATGATGGTGCATATGGTTTGGATGAACTAACCCTCTGTGAGCTTCTCGATGGCAGTTACAAGGCTCCTAAGTTGCCAATAGAAAAGGGAAAGAAGTCTTCAAACTTGAATGATAACATTCTTCATTTAGTTAGAAAGGCATGTTCCATTGTGTCTCCACCTCATGGTGTATCTGACAATGGAAGCAATGTAAAGGCATCTCAAAGCTCCCAGGACCCTAGTTTTTTGAATGGGAGTGGTTCTGATTGTGAAACCAAAAATAAGCAATTAGATGAATTGCTTACCAAAGGCAAGAATCAGGAATATCTTCACGCAAACTGGAGTGAGTTCACTGTGCTTCAGCCCAAGAAAATTTTGGTGCAATTGGGATTATCTGCAGCTCACGAGCTGGAGGCATTTTTGTTTAATTCCACTGCCACTTCAATTTCTGAACAACTTCTGATAAATGCTAAAAGTGATAGCTACATTGGCATGCCACCTTTCCCTTGGTCATTTTCTCATGGTGGACATGGAAAGCCTGGTGTTGAATGTAGTAAAGTGAATTCGACCAAAAGCTCGTGTCAGGGTAAGTGGATTAGAATAGGCAGCAACTCCACGTCAGCCGAAGATGGTAAAAGCATCTGGCTGGGTTTGGTATCAAAGGAACATGGACATAATGCCACTTCTGCGAGCCAGCCAAAAATAGATGACGTTCTTCAACTCATAAGAAGTTTTACTTTAAATTCTCAGCCTCCCTCTGATGGACTATCTGATGATTTTGCTATGGGAAGCAATCCTGAAGCCAAAGTTTCAGAGATTTTGAATTTAGCTTACGATCCTGGTGTCCCTGATTCATTCAATTTAAAAGCTTGCCAACAGCACAAGTTAACTCGATGTTTGAATTGTACTTGCGTTGATAGTAATTCTAAAGAACATTCATCTGGAGTAGTTTCACGGTGTGAGATAACCCCAGATACTTCTAAATTTAATTCAGCATCAAAGGATAAAACAGCCATGATAGAATCTAAAACAGTAACATGTGATGGCTGTTCCGTCAACAGTGTGAAATCAGGATCCAATTGCTGTCCATGGCAATCGTCGAACTGGGAGAAGTATAAAAATGTATACACCCCAGAGTTGCTTACCGCTGCAGAAACATTGTGTCAGATGGCACATACCTCTGATCCGTTGATAGCCGCTGCAAATCATTCCAATGAAAGGATTAGATGGCCAAAGGCACCTCCAATGAAACCAATGAAAGCCCGCAAGTCCCCTCCCTCAATGGACAAATTCGAGAGATCCTTTCCGTCTTCAGGGCATGGCGAACCAATCAAACAGGCAGACTCACCATCTGCAAAGCATCAGCCTGCATCCGAGAAAAAGGCAAATTCCATGCGCCCAAGCAGTAGTGGCCGCGAAGCCATAAGATGGCCGTCGATTGCTGCTCCCGCCTCCTCGTCCCCTCATAAATTTGAGAACCAGAGACTGCCTCATGGAAACAGTGCTGCCACATTCGTGCCCTTATCGTCACCATTTTCATCTCGGCCGGATAAAGCTTATGGCGCTCAGAACAGGAGAGCGCCTCCAAAGTATTCTGCAGCTGCTTTTGAGGGCTCCTCCATTAGAGATTGGATCAGGGGAAGGAACAAGAGGCAGTAG

Network for GWHGAAEX017957

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.120
SRP064423	SRR2545915	Juvenile tuber	13.130
SRP108465	SRR5643513	five period of Gastrodia elata	10.730
	SRR5643514	five period of Gastrodia elata	9.910
	SRR5643515	five period of Gastrodia elata	10.440
	SRR5643524	five period of Gastrodia elata	10.860
	SRR5643525	five period of Gastrodia elata	9.930
	SRR5643528	five period of Gastrodia elata	8.640
	SRR5643658	five period of Gastrodia elata	10.080
	SRR5643659	five period of Gastrodia elata	10.860
	SRR5643660	five period of Gastrodia elata	11.860
	SRR5643661	five period of Gastrodia elata	11.660
	SRR5643662	five period of Gastrodia elata	13.690
	SRR5643663	five period of Gastrodia elata	13.320
	SRR5643664	five period of Gastrodia elata	12.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.850
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.370
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.370
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	12.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.170
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.920
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.420
SRP279888	Gastro	Gastrodia elata tuber	15.50
	Juven	Juvenile tuber	19.43
	Mother_Gastro	Mother tuber of Gastrodia elata	19.98
	Mother_Juven	Mother tuber of Juvenile	14.90