Detail information of GWHGAAEX017958/evm.TU.scaffold_89.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17927.00E-103Reticulon
nrgi|695056381|ref|XP_009416410.1|2.20E-126PREDICTED: reticulon-like protein B2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SUT9|RTNLB_ARATH2.00E-103Reticulon-like protein B2
trEMBLtr|M0TXQ3|M0TXQ3_MUSAM8.00E-127Reticulon-like protein {ECO:0000256|RuleBase:RU210713}
TAIRAT4G112207.00E-103VIRB2-interacting protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009019242641934305-
Transcript Sequence

Network for GWHGAAEX017958

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02453.16Reticulon642183.60E-55
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms140.300
SRR2545915Juvenile tuber164.700
SRP108465SRR5643513five period of Gastrodia elata307.420
SRR5643514five period of Gastrodia elata387.400
SRR5643515five period of Gastrodia elata292.350
SRR5643524five period of Gastrodia elata340.270
SRR5643525five period of Gastrodia elata355.770
SRR5643528five period of Gastrodia elata362.640
SRR5643658five period of Gastrodia elata329.780
SRR5643659five period of Gastrodia elata333.270
SRR5643660five period of Gastrodia elata319.500
SRR5643661five period of Gastrodia elata351.180
SRR5643662five period of Gastrodia elata320.590
SRR5643663five period of Gastrodia elata318.290
SRR5643664five period of Gastrodia elata317.890
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1332.640
SRR6049655Rhizomagastrodiae_C368-T10_good_1244.190
SRR6049656Rhizomagastrodiae_C368-T07_good_1334.880
SRR6049657Rhizomagastrodiae_C368-T07_good_1296.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1311.730
SRR6049659Rhizomagastrodiae_C368-T04_good_1299.020
SRR6049660Rhizomagastrodiae_C368-T01_good_1296.600
SRR6049661Rhizomagastrodiae_C368-T04_good_1289.260
SRR6049662Rhizomagastrodiae_C368-T01_good_1393.940
SRR6049663Rhizomagastrodiae_C368-T01_good_1345.830
SRR6049664Rhizomagastrodiae_C368-T10_good_1423.240
SRR6049665Rhizomagastrodiae_C368-T10_good_1423.240
SRP279888GastroGastrodia elata tuber 282.08
JuvenJuvenile tuber317.99
Mother_GastroMother tuber of Gastrodia elata 253.72
Mother_JuvenMother tuber of Juvenile 247.03