Detail information of GWHGAAEX017964/evm.TU.scaffold_89.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|14521110|ref|NP_126585.1|2.00E-29sun protein (fmu protein) [Pyrococcus abyssi GE5]
KOGKOG23600Proliferation-associated nucleolar protein (NOL1)
nrgi|743799097|ref|XP_010925397.1|0PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Elaeis guineensis]
trEMBLtr|M0T1H0|M0T1H0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P24950_001}
TAIRAT5G261800S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009020818372140681-
Transcript Sequence

Network for GWHGAAEX017964

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01189.16Methyltr_RsmB-F2314413.00E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.320
SRR2545915Juvenile tuber30.340
SRP108465SRR5643513five period of Gastrodia elata16.870
SRR5643514five period of Gastrodia elata16.770
SRR5643515five period of Gastrodia elata15.490
SRR5643524five period of Gastrodia elata15.000
SRR5643525five period of Gastrodia elata13.240
SRR5643528five period of Gastrodia elata13.340
SRR5643658five period of Gastrodia elata15.440
SRR5643659five period of Gastrodia elata16.930
SRR5643660five period of Gastrodia elata15.940
SRR5643661five period of Gastrodia elata16.430
SRR5643662five period of Gastrodia elata16.250
SRR5643663five period of Gastrodia elata17.430
SRR5643664five period of Gastrodia elata20.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.110
SRR6049655Rhizomagastrodiae_C368-T10_good_120.870
SRR6049656Rhizomagastrodiae_C368-T07_good_122.280
SRR6049657Rhizomagastrodiae_C368-T07_good_129.600
SRR6049658Rhizomagastrodiae_C368-T04_good_129.370
SRR6049659Rhizomagastrodiae_C368-T04_good_136.090
SRR6049660Rhizomagastrodiae_C368-T01_good_126.680
SRR6049661Rhizomagastrodiae_C368-T04_good_128.510
SRR6049662Rhizomagastrodiae_C368-T01_good_121.130
SRR6049663Rhizomagastrodiae_C368-T01_good_125.950
SRR6049664Rhizomagastrodiae_C368-T10_good_122.020
SRR6049665Rhizomagastrodiae_C368-T10_good_122.020
SRP279888GastroGastrodia elata tuber 29.60
JuvenJuvenile tuber28.30
Mother_GastroMother tuber of Gastrodia elata 27.48
Mother_JuvenMother tuber of Juvenile 26.68