Detail information of GWHGAAEX017971/evm.TU.scaffold_89.42


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434406569|ref|YP_007149454.1|5.00E-21glycosyltransferase [Cylindrospermum stagnale PCC 7417]
nrgi|672189311|ref|XP_008813809.1|0PREDICTED: uncharacterized protein LOC103724357 [Phoenix dactylifera]
trEMBLtr|M0U874|M0U874_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP11150_001}
TAIRAT4G19460_17.00E-161Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009023422122343627-
Transcript Sequence

Network for GWHGAAEX017971

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13439.5Glyco_transf_4952612.80E-17
PF00534.19Glycos_transf_12874323.00E-22
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.140
SRR2545915Juvenile tuber2.160
SRP108465SRR5643513five period of Gastrodia elata16.840
SRR5643514five period of Gastrodia elata13.590
SRR5643515five period of Gastrodia elata35.380
SRR5643524five period of Gastrodia elata18.910
SRR5643525five period of Gastrodia elata30.220
SRR5643528five period of Gastrodia elata238.890
SRR5643658five period of Gastrodia elata36.920
SRR5643659five period of Gastrodia elata5.710
SRR5643660five period of Gastrodia elata2.870
SRR5643661five period of Gastrodia elata4.630
SRR5643662five period of Gastrodia elata10.340
SRR5643663five period of Gastrodia elata4.960
SRR5643664five period of Gastrodia elata6.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.170
SRR6049655Rhizomagastrodiae_C368-T10_good_15.600
SRR6049656Rhizomagastrodiae_C368-T07_good_14.780
SRR6049657Rhizomagastrodiae_C368-T07_good_15.450
SRR6049658Rhizomagastrodiae_C368-T04_good_17.750
SRR6049659Rhizomagastrodiae_C368-T04_good_18.670
SRR6049660Rhizomagastrodiae_C368-T01_good_18.080
SRR6049661Rhizomagastrodiae_C368-T04_good_18.570
SRR6049662Rhizomagastrodiae_C368-T01_good_14.320
SRR6049663Rhizomagastrodiae_C368-T01_good_16.990
SRR6049664Rhizomagastrodiae_C368-T10_good_14.720
SRR6049665Rhizomagastrodiae_C368-T10_good_14.720
SRP279888GastroGastrodia elata tuber 4.32
JuvenJuvenile tuber3.55
Mother_GastroMother tuber of Gastrodia elata 97.46
Mother_JuvenMother tuber of Juvenile 75.46