Detail information of GWHGAAEX017973/evm.TU.scaffold_89.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|294507855|ref|YP_003571913.1|2.00E-34lysophospholipase [Salinibacter ruber M8]
KOGKOG14554.00E-144Lysophospholipase
nrgi|743798544|ref|XP_010925265.1|6.69E-158PREDICTED: caffeoylshikimate esterase-like [Elaeis guineensis]
Swissprottr|Q9C942|CSE_ARATH1.00E-144Caffeoylshikimate esterase
trEMBLtr|M0T1G4|M0T1G4_MUSAM2.00E-151Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P24890_001}
TAIRAT1G527604.00E-144lysophospholipase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009023652172366676+
Transcript Sequence

Network for GWHGAAEX017973

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.7Hydrolase_41043446.00E-47
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18368CSE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.400
SRR2545915Juvenile tuber24.900
SRP108465SRR5643513five period of Gastrodia elata137.710
SRR5643514five period of Gastrodia elata99.220
SRR5643515five period of Gastrodia elata242.280
SRR5643524five period of Gastrodia elata122.820
SRR5643525five period of Gastrodia elata201.570
SRR5643528five period of Gastrodia elata256.700
SRR5643658five period of Gastrodia elata314.630
SRR5643659five period of Gastrodia elata163.120
SRR5643660five period of Gastrodia elata109.580
SRR5643661five period of Gastrodia elata187.350
SRR5643662five period of Gastrodia elata243.590
SRR5643663five period of Gastrodia elata200.920
SRR5643664five period of Gastrodia elata72.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_173.780
SRR6049655Rhizomagastrodiae_C368-T10_good_182.930
SRR6049656Rhizomagastrodiae_C368-T07_good_166.250
SRR6049657Rhizomagastrodiae_C368-T07_good_176.880
SRR6049658Rhizomagastrodiae_C368-T04_good_177.700
SRR6049659Rhizomagastrodiae_C368-T04_good_196.700
SRR6049660Rhizomagastrodiae_C368-T01_good_160.270
SRR6049661Rhizomagastrodiae_C368-T04_good_165.010
SRR6049662Rhizomagastrodiae_C368-T01_good_172.940
SRR6049663Rhizomagastrodiae_C368-T01_good_161.110
SRR6049664Rhizomagastrodiae_C368-T10_good_181.760
SRR6049665Rhizomagastrodiae_C368-T10_good_181.760
SRP279888GastroGastrodia elata tuber 73.99
JuvenJuvenile tuber29.92
Mother_GastroMother tuber of Gastrodia elata 200.43
Mother_JuvenMother tuber of Juvenile 124.75