Detail information of GWHGAAEX017978/evm.TU.scaffold_89.49


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|32477628|ref|NP_870622.1|9.00E-24auxin-responsive-like protein [Rhodopirellula baltica SH 1]
nrgi|743796836|ref|XP_010924828.1|0PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Elaeis guineensis]
Swissprottr|Q6I581|GH35_ORYSJ0Probable indole-3-acetic acid-amido synthetase GH3.5
trEMBLtr|M0SM63|M0SM63_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P08460_001}
TAIRAT2G463700Auxin-responsive GH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009025257122529549-
Transcript Sequence

Network for GWHGAAEX017978

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.12GH3165601.10E-187
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14506JAR1_4_6 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms104.980
SRR2545915Juvenile tuber75.530
SRP108465SRR5643513five period of Gastrodia elata78.330
SRR5643514five period of Gastrodia elata79.410
SRR5643515five period of Gastrodia elata82.640
SRR5643524five period of Gastrodia elata80.300
SRR5643525five period of Gastrodia elata92.110
SRR5643528five period of Gastrodia elata56.670
SRR5643658five period of Gastrodia elata98.760
SRR5643659five period of Gastrodia elata42.540
SRR5643660five period of Gastrodia elata44.300
SRR5643661five period of Gastrodia elata41.410
SRR5643662five period of Gastrodia elata45.040
SRR5643663five period of Gastrodia elata44.980
SRR5643664five period of Gastrodia elata52.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_177.870
SRR6049655Rhizomagastrodiae_C368-T10_good_155.250
SRR6049656Rhizomagastrodiae_C368-T07_good_165.560
SRR6049657Rhizomagastrodiae_C368-T07_good_1111.100
SRR6049658Rhizomagastrodiae_C368-T04_good_1118.630
SRR6049659Rhizomagastrodiae_C368-T04_good_1146.560
SRR6049660Rhizomagastrodiae_C368-T01_good_197.930
SRR6049661Rhizomagastrodiae_C368-T04_good_1111.390
SRR6049662Rhizomagastrodiae_C368-T01_good_149.530
SRR6049663Rhizomagastrodiae_C368-T01_good_153.270
SRR6049664Rhizomagastrodiae_C368-T10_good_153.790
SRR6049665Rhizomagastrodiae_C368-T10_good_153.790
SRP279888GastroGastrodia elata tuber 60.71
JuvenJuvenile tuber26.63
Mother_GastroMother tuber of Gastrodia elata 70.19
Mother_JuvenMother tuber of Juvenile 30.59