Gene detail

Detail information of GWHGAAEX017981/CADD01407.5.gene

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|695051583\|ref\|XP_009413822.1\|	PREDICTED: uncharacterized protein LOC103995056 isoform X1 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TRY6\|M0TRY6_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P19830_001}
TAIR	AT1G79740	hAT transposon superfamily

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000090	2656078	2662130	+

Transcript Sequence
>GWHTAAEX017981 ATTTTGTTTTCCACGCTGACAAGCAGAGTCAAACCCTAGACACTCTGTTTAGAGTCTTTTTACAGTTTAATAATTTGGGATTGCTCTCTTGATTAAATGCTTTCATGGCTGTTATACAACTTATTCATGCTGTTTCAGGCGTCCGTTTGGTTCGATTGGCGACTGCTGTTGTTTGATTGAACTCGCTCTCGAATGCATGGATGTGAAGATGAACTAAGGATTTCGCGGAGTTTGTGATGGTTGGCTTTCTTAAGAAAACCGTCGATTGATCAGAATTCTTAGTGTTTGATGGTGTGTTCAACTTCGTTTCGTAGTGCTATCCAGTCTTGTGAAGGCGGGTTGAGATATTTTTAGATTAAGGGGCTTTTTGGTTCGCTGTTATTTGAGCACAATGTTCTGCTGTTCCGTAATAACTTCTTACAATAACATTAAAATAGCTACTATATTGCCATCGTTTAGTGTTACTCCTTGAATCCGGATCTTCTTTTTAGCCAATATTTTCGTGTGCAAATGGTGAATGGCTCCACCTTCCTTAATTTTTAGTGTATTCTAATAGTTTTGCTATCATTTGCTTGCGATTTTGGCGAGATTAGGGTTGTCATCTTCTTGATAGCGGTTTTGCCCCCTTTGCCTTTTTTAGGGATAATATTGCCTAAAATTTTTCTTAGCCAAATTCATAAAACAATGACCCAAACACTCAGTTTTGATATTTTAATAACTTTGCCCATAGTATCTAATCAAACATCCCTTAGTCACTTAATGCTGCTAAATTTTCTTAGTACAAGTCATCAACTAGCTAGTGCTTAATTAACGTGTTTGTTGTTCAACTTTCAATTTTTATAGAGAAGGATTTTAAGGGGATGATGTTTTGTAAATGGATTTGGCCATTATTTTGCCTGTAAAGACGACACTTGCATATAAATCCAAATCATCCATCATGTGAAAAAATCCAGTGCTTCCGACAGTTTCTCTGTTATTCCATGAAATCTTGTAATCTCTTATATTTTGTAGCTTTGAGGATTCACTTGATTTAGCAGCTTTTGGAAATAGGCGAACCAATTATTTTTCAGAATTAAGAACTCCAAAATTATTAGATTTTAGATTTCAGTATCTTTATAGTGAATGCACCTTTAAATAAATTTTAAGATGGTTACAAGATACAAGAAAAATCTACAGACAACGAAAATCAAAATTCTTGATTAGACTTTAATCAAAGTCGCTTATAGATAAAACTGAGAAATTGATCGTTATTTGTGAACCAGCAACTTGATGCATTATATATGGATACTGTGTTTCGTATATAGACCTCAAATACATCATTCTAAATAAAAATAAACTTGAATATTAAGATGATGAAATCTTGTAGCTAATACGATGTAATAACACTGAGCTTCTTATATGTATCCATGAATGACCAATCATTTCACTTAACAAAAATGAATTAGCTGAGGTGGTAAAATATGGGGGGCATGTACTGGATAAACGTTGATAGTGCATGAACTAACTATTTTTATTATAAAAAATAGTATAAAAATAACTATCATGAAGTTTTATATTAATGTTGTTTTTTATAATTAGAATTTATTTTGAATGTGTTAATATACTTCATATGAGTGCACATTTCTTAGAAATGCATGAGTTCAATGTTTAAAATATATGTATTGTACTTGTGAGAACTAAATTTTTTGAATATAATGCTCATTTTGAATGATATTAAAAAAGTCCTTTTTAATAACTAATATGTATTTGCATGACCGTGTATTATGCAATACTGCTGCTACTGATTTTTTCTCTTGATTCTGTACGATATACGACATTTCTTGCTTACAAAGTATTTTCCTCTTCTTTTGTGCTGTTATTTGAGCTTACCTGCAGTAAATATTTGTGCCAATACCATGATCATAGTTCTTAATTCCTTATTTTCTTTGTTACCTTTTGGTTAAATGAGTTTTCCGCTGCTTGAAATCATAATAAAATATACTCTTGAAATATAAGACATGAGTGATTGACTATATATTGCATTGCACTTTATTTTTCATTGCACTATTTTTAATGTGTTTAATTCTTAAAAAGTATTGGTGAAACCATGATTAGGCTCAGTTGCCATCTTTTTTATAATTTTCAGCATATTTCATGGCACTCGTGTTAGTGTTAAATGCATAATCACAACAAACTTCAAAATTCTTGTAAATTGTTAGTTTGAATGAAATATTCTTTAAAAAAAAGCACATGCAAGTGATTCTGGAATTCATCTAAGTTAAAAATGAGGCTTAAAAATACCTTTATTAAATGTGTTTGGCTTCCCTTCCCCTACTGAGTAAAAGCTGTATGAAACTCACATTGTTTGCCTTCCAAACTTTAAAAAAAAAAAATTTTTTTTTGGGAGTTTGACCACATGAATTTCATGTGTAGTGTCGAGGAAGAGAATAACTGTTTTCGCCAAAATTGCAGGCCACAGGTGAAAAAGCGAACTCTAAATAGCACTACTATTTATGAATGTTTTCAATTTATAGTGCTATCTGAATAACATTAGCTAGTGGCAATTTCACAATTTCTTAATATTCAGATAACATAGTAGCAAACCAAATGACAATTTCTTGAGATGGTATTGTGAAAAAACATAACATTGCCCTAACAATTTTACAAATAGCAGCGAGCCAAACTAACCTTAATCTCAAAATTTTTGGAGCTTTTAAGAATATATATATATATATATATATATATATATATCATCTTAATTATTTTGTTTATTGCTTATTTTTACTATTCTAGATTTTGTTGTCTTTTTCTGATAATAACTTGTGAAACTTCCTTGTAAACCACACAGGTTCTGAGCTGGAAAGAAACATAAGCTAGTGAGTATTGCATTTCTGTTTATATCATGAAAATCTACATGAGCTTGTTTGGATTTTATCATCATCACTTGTTTGATTTACTTATTGAAGTATTTGTTTTATATCATGTTTACATATTATGCGCCCAAATTTTTAAATAATGTATACATGACATCTAATTTCTACACTTACAAATAAAACATTATCATTTCACAGGTTTTAGGTAGGGCCTGTTCGCCAACAAACTAGATTTAAGTTCAGCAGGATTAACTAAAGCATTAAATCCAAAATTAATAAAACCTGAGGATGCTAAATGAGAGCATTTATTTTGGCTTTGGATCAAGCAAATTCAGTTAAAGCCTATGAACTGTGAGGGGTTTGTGAAATGGATTTGTTAAATCAACCAAATGCGGAGTTACATGTCCGTTCAATTTTAGCTTACTCTAAAACTCGTTTAGTTGAAATTAGAGGGTTTAGGAGAGGATGTTTGATAGCCAGGATTATAGGATTCCCATTTTACCAAAATTTTAAAATTCTGAAATTCTAAAGTTCTAGTTTTACTTGGATTTTACATGATTTCACATATAGATTCTTAGAACTCTTCTAAATATAATTAAATGTGGGTAGTGGTAATGATTTTTTGAAATGCGGAGATAATATTTTTCTTGTAGATATCAAAGTTTCTGAGCTAGTCATGCATATTATAAAGTGAGTATTACAAAATAAAAATCTTTTGTTTTTTTTTATTTTGCAGAGGAAATGGCTGCTTTAAGCCCTATAAATGTTATATTATTTCTTCACATGTTTCCGTTCTCAACGTTTAGTCATCTTTGTGCTCAAAATGCTTTGGTAACCACAAATCGTTGCTACAATGGTTCGAGAGAAAGATGTGTGCTGGGAGTATTGTGAAAGGTTAGAAGGCAACAAGGTTAGATGCAAATTCTGTCTGAAAGTTTTAAACGGTGGCATAAGTCGACTAAAGTTCCATCTTTCGCGGCTTCCCAGCAAAGGCGTTCATCCATGCAGCAAGGTTAGAGACGAGGTAACAGATAGGGTGAAAGCAATTTTAGCGATGAAACATGAGGGGAAGGAAGTTGCTACAGTTAAAAAGCAATGTCTGGGCGAAGCATTGTCTCCAGGAATTATATCTAGTTCCAAGTGGCTCGTGCCTATGGAGACTGCTGCAAGCTCTGTGGGAAAACTCTTTCAGCCGGGCACTGCAACAGCCAGGCCTCAGCCCCCTCTGGATGCAGAGCGTTGCATAGCCGAATTTTTCTTCGAAAGCAAGCTTGATTTCAGCGTCGCCCATTCGTCCTCATATCTCCTTGTGCTTGAGGCTCTTGGCGGCCCGGGATTTAGGGGCCCAACGGTTGATTCTTTGAGAACCACCTGGTTGCAGAAACTCAAGTCTGAACTCACCTTGCAGATAAAGGAGATTGAGAAAGATTGGGCTTCCACCGGCTGCACTATCATAGCTGATACCTGGACCGACAATAAAGCGCGCGCATTGATAAATTTCTATATATCATATCCTCTGGGTACGTTCTTCCATAAATCAGTGGATGCCTCCACATACTTCAAGAACACCAGATGCCTCTGCGATCTATTCGATTCAGTTATTCAGGACATTGGTCCCGAGAACGTGGTTCAGGTGATCATGGACAATTCCTTGAACTATGCTGGTGTGGGGAATCACATTTTGCAGTCTTATAACTCAATTTTCTGGTCTCCTTGTGCTTCCCACTGCTTGAATCTTATCCTGGAGGATTTCTCCAGAATTGATTGGGTGAACAGATGCATCCTGCAGGCGCAAACCGTAACTAGATTCATCTATAACAACATATGGATTCTTGAATTAATGAGAAAATTCACTGGAGGCCAGGAGCTTGTTCGCAGTGGCATCACCAAATCCACATCTAATTTCCTTACATTGCAGTCTATGCTGAGGCAGAAGTCGAGGCTGAAGCACATGTTCAACAGCCCGGATTATTTGACCTCATCCTATTCAAACCGATCTCCCGGTTTATCCTGCATTGATATACTTGAGGACATTGAATTCTGGAGAGCGGTGGAAGAGATTGCAAGCGTGTCCGAACCCCTTTTGAAGGTTTTAAGGGATGTCTCCGGCGGTAAGCCTGCAGTTGGATCTATATATGAATCAATGACGAGGGCTAAAGAATCCATTAGGACTTACTACATAATGGATGAAGTAAAATGCAGTACATTCCTTGACATAGTGGACAGAAGATGGCAGAATCAACTCCATTCACCGCTTCATGCTGCTGCTGCTTTCCTTAACCCTAGCATCCAATACAACATTGAAGTTAAGTTTCTTGGGCTTATAAAAGAGGAATTTTTTGCAGTTCTGGAGAAGCTGCTTCCTACACCTGAACTCCGGCATGACCTCACATCACAGATCTGTATTTTTCGGAAAGCACAAGGCATGTTTGGTTCAAATCTTGCTAAAGAGGCGCGCAACAATACTGCTCCAGGGATGTGGTGGGAGCAATATGGCGATTCAGCACCCAGCTTACAGAGGGTTGCGGTCAGAATACTTAACCAAGTGTGCAGTGCTTTAGCTTTTGATAGAAACTGGAGCGCTATCCAGCAGTTTCACTCTGAGAAACGCAATAAACTGGACAAAGAGACACTGAGTGATCTATTATATGTTCACTATAATCTGAAGCTCAAGGCAAAAGCCAGGTGCTTAGACTCTGATCCGATTGTGCTTGATGAGATTGATATGACTTCAGAGTGGGTGGAGGAAATTGAAAATCCTGCCCCAGCCCAATGGCTTGATCGATTTAGTTCTGCTCTTGATGGCGGCGATTTGAACACTAGACAGTTTAGTAATTCTATATTTGGTCCAAATGATCACATATTTAATTTGTAAAGGTATGTTAAATTACTTGGTAAACTTTAGGTTACATTGATAATTTACAAGCTTGTAATACTTTTGTAAATAATTTTTGTCCTTTGTAAGCTTAGAAAATGCTCATTTTCTCGGCCCTGTTCAGATGTTGTGAATTTTAAGTGAGAAATGAGAAATGTCTTGAAAATTGTAGATTATTCATAATTTATGTAGATAGGCGATGGGAGAGGGTATGTTTTGATTTGTTTCATAAAGAGTTGCA

Network for GWHGAAEX017981

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02892.14	zf-BED	1149	1184	0.00018
PF04937.14	DUF659	1307	1458	2.40E-56
PF05699.13	Dimer_Tnp_hAT	1678	1746	3.40E-09

Protein Sequence

>GWHPAAEX017981
ILFSTLTSRVKPTLCLESFYSLIIWDCSLDMLSWLLYNLFMLFQASVWFDWRLLLFDTRSRMHGCEDELRISRSLWLAFLRKPSIDQNSCLMVCSTSFRSAIQSCEGGLRYFIKGLFGSLLFEHNVLLFRNNFLQHNSYYIAIVCYSLNPDLLFSQYFRVQMVNGSTFLNFCILIVLLSFACDFGEIRVVIFLIAVLPPLPFLGIILPKIFLSQIHKTMTQTLSFDILITLPIVSNQTSLSHLMLLNFLSTSHQLASALTCLLFNFQFLRRILRGCFVNGFGHYFACKDDTCIIQIIHHVKKSSASDSFSVIPNLVISYILLGFTFSSFWKANQLFFRIKNSKIIRFISVSLMHLINFKMVTRYKKNLQTTKIKILDTLIKVAYRNEIDRYLTSNLMHYIWILCFVYRPQIHHSKKTILRNLVANTMHASYMYPMTNHFTQKISGGKIWGACTGTLIVHELTIFIIKNSIKITIMKFYINVVFYNNLFMCYTSYECTFLRNAVQCLKYMYCTCENIFICSFMILKKSFLITNMYLHDRVLCNTAATDFFSFCTIYDISCLQSIFLFFCAVIAYLQIFVPIPSFLIPYFLCYLLVKVFRCLKSNILLKYKTVIDYILHCTLFFIALFLMCLILKKYWNHDAQLPSFLFSAYFMALVLVLNASQQTSKFLIVSLNEIFFKKKHMQVILEFIVKNEAKYLYMCLASLPLLSKSCMKLTLFAFQTLKKKNFFLGVPHEFHVCRGRELFSPKLQATGEKANSKHYYLMFSIYSAIITLASGNFTISYSDNIVANQMTISDGIVKKHNIALTILQIAASQTNLNLKIFGAFKNIYIYIYIYIYHLNYFVYCLFLLFILLSFSDNNLNFLVNHTGSELERNISVLHFCLYHENLHELVWILSSSLVFTYSICFISCLHIMRPNFIMYTHLISTLTNKTLSFHRFVGPVRQQTRFKFSRINSIKSKINKTGCMRAFILALDQANSVKAYELGVCEMDLLNQPNAELHVRSILAYSKTRLVEIRGFRRGCLIARIIGFPFYQNFKILKFSSSFTWILHDFTYRFLELFILNVGSGNDFLKCGDNIFLVDIKVSELVMHIIKVLQNKNLLFFFILQRKWLLALMLYYFFTCFRSQRLVIFVLKMLWPQIVATMVREKDVCWEYCERLEGNKVRCKFCLKVLNGGISRLKFHLSRLPSKGVHPCSKVRDEVTDRVKAILAMKHEGKEVATVKKQCLGEALSPGIISSSKWLVPMETAASSVGKLFQPGTATARPQPPLDAERCIAEFFFESKLDFSVAHSSSYLLVLEALGGPGFRGPTVDSLRTTWLQKLKSELTLQIKEIEKDWASTGCTIIADTWTDNKARALINFYISYPLGTFFHKSVDASTYFKNTRCLCDLFDSVIQDIGPENVVQVIMDNSLNYAGVGNHILQSYNSIFWSPCASHCLNLILEDFSRIDWVNRCILQAQTVTRFIYNNIWILELMRKFTGGQELVRSGITKSTSNFLTLQSMLRQKSRLKHMFNSPDYLTSSYSNRSPGLSCIDILEDIEFWRAVEEIASVSEPLLKVLRDVSGGKPAVGSIYESMTRAKESIRTYYIMDEVKCSTFLDIVDRRWQNQLHSPLHAAAAFLNPSIQYNIEVKFLGLIKEEFFAVLEKLLPTPELRHDLTSQICIFRKAQGMFGSNLAKEARNNTAPGMWWEQYGDSAPSLQRVAVRILNQVCSALAFDRNWSAIQQFHSEKRNKLDKETLSDLLYVHYNLKLKAKARCLDSDPIVLDEIDMTSEWVEEIENPAPAQWLDRFSSALDGGDLNTRQFSNSIFGPNDHIFNLRYVKLLGKLVTLIIYKLVILLIIFVLCKLRKCSFSRPCSDVVNFKEMRNVLKIVDYSFMIGDGRGYVLICFIKSC

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding
GO:0046983	Molecular Function	protein dimerization activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.910
SRP064423	SRR2545915	Juvenile tuber	12.440
SRP108465	SRR5643513	five period of Gastrodia elata	21.130
	SRR5643514	five period of Gastrodia elata	19.750
	SRR5643515	five period of Gastrodia elata	20.180
	SRR5643524	five period of Gastrodia elata	21.580
	SRR5643525	five period of Gastrodia elata	11.090
	SRR5643528	five period of Gastrodia elata	10.140
	SRR5643658	five period of Gastrodia elata	12.110
	SRR5643659	five period of Gastrodia elata	16.270
	SRR5643660	five period of Gastrodia elata	15.150
	SRR5643661	five period of Gastrodia elata	14.610
	SRR5643662	five period of Gastrodia elata	14.780
	SRR5643663	five period of Gastrodia elata	14.460
	SRR5643664	five period of Gastrodia elata	13.250
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	29.370
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	24.850
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	25.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	26.470
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	29.440
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	26.670
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	22.470
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	26.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	24.440
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	24.440
SRP279888	Gastro	Gastrodia elata tuber	19.16
	Juven	Juvenile tuber	26.41
	Mother_Gastro	Mother tuber of Gastrodia elata	28.67
	Mother_Juven	Mother tuber of Juvenile	24.78