Detail information of GWHGAAEX017997/evm.TU.scaffold_89.71
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|284035384|ref|YP_003385314.1| | 1.00E-39 | cytochrome P450 [Spirosoma linguale DSM 74] |
| KOG | KOG0156 | 3.00E-177 | Cytochrome P450 CYP2 subfamily |
| nr | gi|727640212|ref|XP_010491421.1| | 2.64E-179 | PREDICTED: flavonoid 3'-monooxygenase-like [Camelina sativa] |
| Swissprot | tr|Q9SD85|F3PH_ARATH | 8.00E-178 | Flavonoid 3'-monooxygenase |
| trEMBL | tr|Q9FPN2|Q9FPN2_MATIN | 2.00E-177 | Flavonoid 3'-hydroxylase {ECO:0000313|EMBL:AAG49301.1} |
| TAIR | AT5G07990 | 3.00E-177 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000090 | 3016911 | 3019094 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX017997
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 34 | 481 | 5.40E-96 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP75B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05280 | CYP75B1 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Flavonoid biosynthesis | map00941 | ||
| Flavone and flavonol biosynthesis | map00944 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.560 |
| SRR2545915 | Juvenile tuber | 12.940 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 29.780 |
| SRR5643514 | five period of Gastrodia elata | 18.630 | |
| SRR5643515 | five period of Gastrodia elata | 110.260 | |
| SRR5643524 | five period of Gastrodia elata | 19.980 | |
| SRR5643525 | five period of Gastrodia elata | 36.970 | |
| SRR5643528 | five period of Gastrodia elata | 38.700 | |
| SRR5643658 | five period of Gastrodia elata | 19.560 | |
| SRR5643659 | five period of Gastrodia elata | 168.070 | |
| SRR5643660 | five period of Gastrodia elata | 61.850 | |
| SRR5643661 | five period of Gastrodia elata | 151.450 | |
| SRR5643662 | five period of Gastrodia elata | 219.110 | |
| SRR5643663 | five period of Gastrodia elata | 147.220 | |
| SRR5643664 | five period of Gastrodia elata | 376.140 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 154.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 45.860 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 75.160 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 103.530 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 79.770 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 99.510 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 219.560 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 89.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 48.030 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 162.160 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.090 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.090 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 120.59 |
| Juven | Juvenile tuber | 12.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 235.42 | |
| Mother_Juven | Mother tuber of Juvenile | 121.04 |