Detail information of GWHGAAEX018008/evm.TU.scaffold_89.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|1.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
nrgi|743769569|ref|XP_010915077.1|0PREDICTED: LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Elaeis guineensis]
Swissprottr|C0LGF5|Y1341_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At1g34110 (Precursor)
trEMBLtr|A0A061FIG9|A0A061FIG9_THECC0Leucine-rich receptor-like protein kinase family protein isoform 2 {ECO:0000313|EMBL:EOY16876.1}
TAIRAT1G341100Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009031611443163066-
Transcript Sequence

Network for GWHGAAEX018008

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1444082.00E-45
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-XI-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.400
SRR2545915Juvenile tuber9.930
SRP108465SRR5643513five period of Gastrodia elata6.050
SRR5643514five period of Gastrodia elata5.150
SRR5643515five period of Gastrodia elata4.440
SRR5643524five period of Gastrodia elata3.680
SRR5643525five period of Gastrodia elata5.570
SRR5643528five period of Gastrodia elata3.570
SRR5643658five period of Gastrodia elata4.550
SRR5643659five period of Gastrodia elata6.620
SRR5643660five period of Gastrodia elata8.480
SRR5643661five period of Gastrodia elata8.450
SRR5643662five period of Gastrodia elata6.990
SRR5643663five period of Gastrodia elata8.110
SRR5643664five period of Gastrodia elata12.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.510
SRR6049655Rhizomagastrodiae_C368-T10_good_17.460
SRR6049656Rhizomagastrodiae_C368-T07_good_19.530
SRR6049657Rhizomagastrodiae_C368-T07_good_18.960
SRR6049658Rhizomagastrodiae_C368-T04_good_17.500
SRR6049659Rhizomagastrodiae_C368-T04_good_18.070
SRR6049660Rhizomagastrodiae_C368-T01_good_17.860
SRR6049661Rhizomagastrodiae_C368-T04_good_17.740
SRR6049662Rhizomagastrodiae_C368-T01_good_17.900
SRR6049663Rhizomagastrodiae_C368-T01_good_17.740
SRR6049664Rhizomagastrodiae_C368-T10_good_16.440
SRR6049665Rhizomagastrodiae_C368-T10_good_16.440
SRP279888GastroGastrodia elata tuber 6.29
JuvenJuvenile tuber5.27
Mother_GastroMother tuber of Gastrodia elata 3.68
Mother_JuvenMother tuber of Juvenile 2.02