Detail information of GWHGAAEX018012/evm.TU.scaffold_89.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|379729731|ref|YP_005321927.1|9.00E-14peptidase c14 caspase catalytic subunit p20 [Saprospira grandis str. Lewin]
KOGKOG11640Casein kinase (serine/threonine/tyrosine protein kinase)
nrgi|743770225|ref|XP_010915404.1|0PREDICTED: uncharacterized protein LOC105040538 [Elaeis guineensis]
Swissprottr|P42158|KC1D_ARATH2.00E-58Casein kinase I isoform delta-like
trEMBLtr|A0A067KGP9|A0A067KGP9_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP34168.1}
TAIRAT3G136700Protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009032023253243324+
Transcript Sequence

Network for GWHGAAEX018012

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase392741.00E-15
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCK1_CK1-Pl

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.940
SRR2545915Juvenile tuber19.180
SRP108465SRR5643513five period of Gastrodia elata7.180
SRR5643514five period of Gastrodia elata7.420
SRR5643515five period of Gastrodia elata6.940
SRR5643524five period of Gastrodia elata5.990
SRR5643525five period of Gastrodia elata13.150
SRR5643528five period of Gastrodia elata12.300
SRR5643658five period of Gastrodia elata14.310
SRR5643659five period of Gastrodia elata7.810
SRR5643660five period of Gastrodia elata8.720
SRR5643661five period of Gastrodia elata9.270
SRR5643662five period of Gastrodia elata10.140
SRR5643663five period of Gastrodia elata9.610
SRR5643664five period of Gastrodia elata10.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.870
SRR6049655Rhizomagastrodiae_C368-T10_good_16.760
SRR6049656Rhizomagastrodiae_C368-T07_good_111.260
SRR6049657Rhizomagastrodiae_C368-T07_good_113.520
SRR6049658Rhizomagastrodiae_C368-T04_good_121.020
SRR6049659Rhizomagastrodiae_C368-T04_good_121.020
SRR6049660Rhizomagastrodiae_C368-T01_good_116.070
SRR6049661Rhizomagastrodiae_C368-T04_good_115.940
SRR6049662Rhizomagastrodiae_C368-T01_good_112.540
SRR6049663Rhizomagastrodiae_C368-T01_good_114.220
SRR6049664Rhizomagastrodiae_C368-T10_good_19.970
SRR6049665Rhizomagastrodiae_C368-T10_good_19.970
SRP279888GastroGastrodia elata tuber 13.59
JuvenJuvenile tuber11.81
Mother_GastroMother tuber of Gastrodia elata 16.85
Mother_JuvenMother tuber of Juvenile 16.59