Gene detail

Detail information of GWHGAAEX018023/evm.TU.scaffold_89.97

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672109747\|ref\|XP_008791798.1\|	0	PREDICTED: proton pump-interactor 1-like isoform X3 [Phoenix dactylifera]
Swissprot	tr\|O23144\|PPI1_ARATH	6.00E-127	Proton pump-interactor 1
trEMBL	tr\|U5DG85\|U5DG85_AMBTC	5.00E-170	Uncharacterized protein {ECO:0000313\|EMBL:ERN20487.1}
TAIR	AT4G27500	8.00E-122	proton pump interactor 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000090	3619433	3637174	-

Transcript Sequence
>GWHTAAEX018023 GTGCGTGCACTGCCGGCCTGATCAGAAACACCGAATTGTTTCGGGTAGCACCTCCAAACTCGTTTTGCCAGGAAGTTAATAATAATAATAAAAAAATCCATGGCAACGCCCCCATCCATTAATTTCTTCTAACTTGCCACGCGCACGCCTCTGGTATCGGGTCACAATATAAGGTCACTTATTTGGGTCCTGAGAGGAGGCGCCCACCCTGGATCGAGGAAAGGGAGAAGAAAATTTGGAGAAGTTGAAATACAATGGAAACCGCGGGTCCGACGCATCTCCGTCGCTGTGCTTGCAGATCTTTTTTTGGTCCCCTGATCTCTTATTGCTGAACGATCGCTTACCATTTATAGGCCTTCTCATCTTTGGGCGGAGAGGGGGAGGCAGAAGATCCGAGGCCCAGTTTCCGTGGATCATCTCTTCTTACCCGCTTAAGCAATTGTTGCCCCTCTCTGCTCGTCGACCGTCCTTGATCTAAGAAAAGCATGGTTATGGAAGTACTTGGGGCGGAGATCATTCCTGGGCAGGCAAAAACTGTAATTGATGAAGAAGTAAATGTTGAAAAAAATAAAATGATTAATAAGGCTGATTGTCCTGAGAAGATTGATTTACTGAACGGTTCAAGTGTGGTAAATGGAGCGAGTAAAGAAGTTGAGCATCTGGCTGATTTTGCAGCCCCCAAGGATGCTGTAGATGAGTGGCCTGAAAATAAGCAAACACATTACTTTTACTTTATTAGGTTCAGATCTTATGAAGATCCAAAGTTGAAAACAAAAATAGAACAAGCTGACAAAGATGTTCAAAGGAAAACTCAAGCTCGGATACAAATCACCGAGGCATTGAAGGAAAAAAGGTCTGAAAAAGCTGCTCTGATCTCACAATTAAAACCATTGCAAGAAGAGGAAAGGCAGTTCCGGGCAGTCATGGATGGGAAAAGAAAGGAAATGGAACCTCTTCAAGCTGCTTTGGGCAAGCTTCGTGTTACTAAAAATACTGCAGCAGAAAAAGGTGTAGGTTTGTGCTCTTCTGAGGAAGAGCTTAATGATACTATCAAGAGCTTACAGTACTGCATTCAGCATGAAAGCAACACATTGGCTGAGGAGAAACAGCTGCTTAAAGAGATCAAACTACTTGAAGCATCAAGGGAGAAAGTCATTGCTAATGCTGCCATGAGGACTAAGATTCAAGAATCTTTTGGTCAGAGAGACGTTATCCAAGATCAAGTCAAACTAATAGGCTCTGATCTTGATGGGGTAAGGAAAGAGCAACAAGCAATCAGGGCAAAAATACAGCATCTAGAGGAAAAGTTGAACGTTGTTAGAACGGAACTTGATTCCTTACAAAATGAACTAGTAATTATTAATGAGGCCAGGGACAAGGCATATCAGACATTTTCCTTACTGAGGAAAGAACGAGATGAGTCGAATTCAAGTTTCTTCGCGTACCGTTCACTCCTGAACAATGCAAAGGGCCTTTCTATTACCAAAGACGTATCTGCGCTGAAAGAGCTTTCTCTCAATGAGGTAGAGAAATTCATGTCGCAGTGGAGCGGCAGCAAATCCTTTAGAGATGATTACGAAAAGAGGATGCTTCCCTCGCTGGACGCCAGACAGCTGAGCAGAGATGGCCGAATGAGGAATTTTGATGAAAAACCGATTCTCTCCGCACCACAAGCAACCCCCGAGCCAGAGAAAGAGCCAGCCAAACCCGAGAAAGAGCCTGGCAAACCCACCTCAAAAAAAGAAAAGGAGAGTGCAATCTCTCCTCCCCCGGAAGTGCGGGCCAATGCGGCGCCGGAGGCTGGAGAAATTGCCCCAGAATCCAGAGACATTGATCCCACAAAGCTGAAAGAGATGAAGAGAGAGGAGGAGATTGTCAAGGCCAAGTCTGCCATGGAACGAAAGAAGAAGTTGGCCGATAAGGCAGCCGTCAAGGCCGCAGTCAGAGCCCAAAAGGAAGCCGAAAAGAAGCAGAAGGAAAAGGAGAAGAAGGCCCGAAAGAAAGCCGGGACATCTTCGCTGCAGCCGGTTGATGCTGAGCTGTCGGAAGAAGCAGAGCCGGAGAAGGATGCCGAACCCGAGATGCATGAAGGCATTGCTAGTGCCCCTTCTGCGGAAAGGAGCAAGGACAAGTTTAAAGAGAGATCGCTTCGTTCGCGTGGACGCCCCAAAGTCCAGCAGAACCAAATACCCAAGATTCTACTCAAGAAGAAAAAGCAGCATCCAAGCTGGTGGCTCTGGGCCGCCGCTCCCGCTGCTATCTGTGCCTTTCTAGTTGCACTCGTCGGCCTCTACTATTCTCTCCGCAAGACCCAATGAATGAGCGTAATGGTGAAGTTTTTTGGCAGCTTGATTCAATTTTAACATAATAAACTTTATTTATATGTTTATTCTTGCAGTTTGAAATGTGTCGGTTTAGTATAGACATCTGCTGCAGAATCTGCTTCTTTTTCTTTATATAGCTTTGACAGAGCTCTTTCGCTGTTTTAATTTTTATAGTATTCTTTTAAATGTTATGCATGCTGCGACAATAAACGGTGCTCACTTATTTATCCTAAACTCTTGTTGATTGCCTTCTCAGTTTACGTTTTGTTCTAATTAAACACTTGATTTATATACTTTTTGTGATGGTTTCAAGGATATATGGACATATTA

Network for GWHGAAEX018023

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	321.690
SRP064423	SRR2545915	Juvenile tuber	314.750
SRP108465	SRR5643513	five period of Gastrodia elata	227.640
	SRR5643514	five period of Gastrodia elata	201.380
	SRR5643515	five period of Gastrodia elata	238.190
	SRR5643524	five period of Gastrodia elata	190.260
	SRR5643525	five period of Gastrodia elata	170.730
	SRR5643528	five period of Gastrodia elata	199.520
	SRR5643658	five period of Gastrodia elata	171.030
	SRR5643659	five period of Gastrodia elata	312.620
	SRR5643660	five period of Gastrodia elata	346.700
	SRR5643661	five period of Gastrodia elata	349.150
	SRR5643662	five period of Gastrodia elata	315.580
	SRR5643663	five period of Gastrodia elata	315.060
	SRR5643664	five period of Gastrodia elata	355.720
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	215.000
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	203.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	221.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	246.090
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	311.080
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	368.550
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	272.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	284.390
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	174.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	244.320
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	187.830
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	187.830
SRP279888	Gastro	Gastrodia elata tuber	250.52
	Juven	Juvenile tuber	207.00
	Mother_Gastro	Mother tuber of Gastrodia elata	211.33
	Mother_Juven	Mother tuber of Juvenile	235.35