Detail information of GWHGAAEX018030/evm.TU.scaffold_89.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695068509|ref|XP_009381201.1|1.97E-40PREDICTED: protodermal factor 1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9S728|PDF1_ARATH1.00E-22Protodermal factor 1 (Precursor)
trEMBLtr|M0RM06|M0RM06_MUSAM2.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P27820_001}
TAIRAT2G428403.00E-22protodermal factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009037993333800544+
Transcript Sequence

Network for GWHGAAEX018030

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.850
SRR2545915Juvenile tuber6.970
SRP108465SRR5643513five period of Gastrodia elata38.590
SRR5643514five period of Gastrodia elata31.510
SRR5643515five period of Gastrodia elata13.360
SRR5643524five period of Gastrodia elata24.520
SRR5643525five period of Gastrodia elata8.530
SRR5643528five period of Gastrodia elata0.090
SRR5643658five period of Gastrodia elata0.130
SRR5643659five period of Gastrodia elata2.280
SRR5643660five period of Gastrodia elata0.680
SRR5643661five period of Gastrodia elata0.230
SRR5643662five period of Gastrodia elata0.080
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.380
SRR6049655Rhizomagastrodiae_C368-T10_good_192.980
SRR6049656Rhizomagastrodiae_C368-T07_good_152.780
SRR6049657Rhizomagastrodiae_C368-T07_good_144.390
SRR6049658Rhizomagastrodiae_C368-T04_good_123.790
SRR6049659Rhizomagastrodiae_C368-T04_good_112.520
SRR6049660Rhizomagastrodiae_C368-T01_good_120.820
SRR6049661Rhizomagastrodiae_C368-T04_good_183.720
SRR6049662Rhizomagastrodiae_C368-T01_good_163.320
SRR6049663Rhizomagastrodiae_C368-T01_good_124.790
SRR6049664Rhizomagastrodiae_C368-T10_good_152.520
SRR6049665Rhizomagastrodiae_C368-T10_good_152.520
SRP279888GastroGastrodia elata tuber 0.07
JuvenJuvenile tuber1.36
Mother_GastroMother tuber of Gastrodia elata 0.17
Mother_JuvenMother tuber of Juvenile 0.79