Detail information of GWHGAAEX018033/evm.TU.scaffold_89.110


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|32473375|ref|NP_866369.1|1.00E-54nodulin-26 [Rhodopirellula baltica SH 1]
KOGKOG02238.00E-131Aquaporin (major intrinsic protein family)
nrgi|720081091|ref|XP_010242173.1|6.39E-141PREDICTED: aquaporin NIP1-1-like [Nelumbo nucifera]
Swissprottr|Q8LFP7|NIP12_ARATH2.00E-131Aquaporin NIP1-2, N-terminally processed
trEMBLtr|M0T721|M0T721_MUSAM2.00E-138Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P14730_001}
TAIRAT4G189108.00E-131NOD26-like intrinsic protein 1;2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009039874593998296+
Transcript Sequence

Network for GWHGAAEX018033

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP242366.20E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms101.840
SRR2545915Juvenile tuber20.310
SRP108465SRR5643513five period of Gastrodia elata37.220
SRR5643514five period of Gastrodia elata25.960
SRR5643515five period of Gastrodia elata25.580
SRR5643524five period of Gastrodia elata21.480
SRR5643525five period of Gastrodia elata8.080
SRR5643528five period of Gastrodia elata5.760
SRR5643658five period of Gastrodia elata7.880
SRR5643659five period of Gastrodia elata9.880
SRR5643660five period of Gastrodia elata12.220
SRR5643661five period of Gastrodia elata7.170
SRR5643662five period of Gastrodia elata7.180
SRR5643663five period of Gastrodia elata7.710
SRR5643664five period of Gastrodia elata7.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_139.450
SRR6049655Rhizomagastrodiae_C368-T10_good_144.630
SRR6049656Rhizomagastrodiae_C368-T07_good_161.080
SRR6049657Rhizomagastrodiae_C368-T07_good_197.120
SRR6049658Rhizomagastrodiae_C368-T04_good_186.440
SRR6049659Rhizomagastrodiae_C368-T04_good_1140.970
SRR6049660Rhizomagastrodiae_C368-T01_good_153.740
SRR6049661Rhizomagastrodiae_C368-T04_good_194.120
SRR6049662Rhizomagastrodiae_C368-T01_good_147.460
SRR6049663Rhizomagastrodiae_C368-T01_good_120.510
SRR6049664Rhizomagastrodiae_C368-T10_good_125.260
SRR6049665Rhizomagastrodiae_C368-T10_good_125.260
SRP279888GastroGastrodia elata tuber 9.65
JuvenJuvenile tuber36.10
Mother_GastroMother tuber of Gastrodia elata 87.27
Mother_JuvenMother tuber of Juvenile 100.10