Detail information of GWHGAAEX018038/CADD01411.1.gene


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|148658166|ref|YP_001278371.1|2.00E-23nucleotidyl transferase [Roseiflexus sp. RS-1]
KOGKOG13222.00E-64GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase
nrgi|357112936|ref|XP_003558261.1|6.29E-70PREDICTED: probable mannose-1-phosphate guanylyltransferase 1 [Brachypodium distachyon]
Swissprottr|Q941T9|GMPP2_ORYSJ1.00E-71Probable mannose-1-phosphate guanylyltransferase 2
trEMBLtr|I1H726|I1H726_BRADI2.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G66930.1}
TAIRAT2G397702.00E-64Glucose-1-phosphate adenylyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000088442825207+
Transcript Sequence

Network for GWHGAAEX018038

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.22NTP_transferase381712.90E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00966GMPP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fructose and mannose metabolismmap00051
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0016779Molecular Functionnucleotidyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.430
SRR2545915Juvenile tuber7.570
SRP108465SRR5643513five period of Gastrodia elata5.160
SRR5643514five period of Gastrodia elata7.360
SRR5643515five period of Gastrodia elata5.660
SRR5643524five period of Gastrodia elata6.950
SRR5643525five period of Gastrodia elata11.290
SRR5643528five period of Gastrodia elata7.770
SRR5643658five period of Gastrodia elata9.700
SRR5643659five period of Gastrodia elata3.760
SRR5643660five period of Gastrodia elata4.830
SRR5643661five period of Gastrodia elata2.870
SRR5643662five period of Gastrodia elata3.560
SRR5643663five period of Gastrodia elata2.880
SRR5643664five period of Gastrodia elata3.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.120
SRR6049655Rhizomagastrodiae_C368-T10_good_13.800
SRR6049656Rhizomagastrodiae_C368-T07_good_18.680
SRR6049657Rhizomagastrodiae_C368-T07_good_110.480
SRR6049658Rhizomagastrodiae_C368-T04_good_16.350
SRR6049659Rhizomagastrodiae_C368-T04_good_16.370
SRR6049660Rhizomagastrodiae_C368-T01_good_16.380
SRR6049661Rhizomagastrodiae_C368-T04_good_16.830
SRR6049662Rhizomagastrodiae_C368-T01_good_19.300
SRR6049663Rhizomagastrodiae_C368-T01_good_18.320
SRR6049664Rhizomagastrodiae_C368-T10_good_16.000
SRR6049665Rhizomagastrodiae_C368-T10_good_16.000
SRP279888GastroGastrodia elata tuber 10.10
JuvenJuvenile tuber8.62
Mother_GastroMother tuber of Gastrodia elata 6.40
Mother_JuvenMother tuber of Juvenile 11.87