Detail information of GWHGAAEX018041/evm.TU.scaffold_9.5
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|310820193|ref|YP_003952551.1| | 6.00E-11 | glutaredoxin [Stigmatella aurantiaca DW4/3-1] |
| KOG | KOG1752 | 1.00E-35 | Glutaredoxin and related proteins |
| nr | gi|695073190|ref|XP_009383750.1| | 8.03E-45 | PREDICTED: putative glutaredoxin-C14 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q0IMV4|GRC14_ORYSJ | 2.00E-40 | Putative glutaredoxin-C14 |
| trEMBL | tr|M0RS08|M0RS08_MUSAM | 3.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P13780_001} |
| TAIR | AT3G62950 | 1.00E-35 | Thioredoxin superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000001 | 544105 | 544667 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018041
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00462.23 | Glutaredoxin | 13 | 76 | 1.30E-11 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0009055 | Molecular Function | electron carrier activity |
| GO:0015035 | Molecular Function | protein disulfide oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.670 |
| SRR2545915 | Juvenile tuber | 4.320 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.000 |
| SRR5643514 | five period of Gastrodia elata | 0.000 | |
| SRR5643515 | five period of Gastrodia elata | 0.570 | |
| SRR5643524 | five period of Gastrodia elata | 0.000 | |
| SRR5643525 | five period of Gastrodia elata | 7.240 | |
| SRR5643528 | five period of Gastrodia elata | 31.800 | |
| SRR5643658 | five period of Gastrodia elata | 7.580 | |
| SRR5643659 | five period of Gastrodia elata | 1.830 | |
| SRR5643660 | five period of Gastrodia elata | 0.000 | |
| SRR5643661 | five period of Gastrodia elata | 4.070 | |
| SRR5643662 | five period of Gastrodia elata | 3.530 | |
| SRR5643663 | five period of Gastrodia elata | 0.280 | |
| SRR5643664 | five period of Gastrodia elata | 4.250 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.000 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.580 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.120 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.410 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.270 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.230 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.100 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 2.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.50 |
| Juven | Juvenile tuber | 5.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.71 | |
| Mother_Juven | Mother tuber of Juvenile | 4.13 |