Detail information of GWHGAAEX018072/evm.TU.scaffold_9.66


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108804700|ref|YP_644637.1|2.00E-68major facilitator transporter [Rubrobacter xylanophilus DSM 9941]
KOGKOG02533.00E-175Synaptic vesicle transporter SV2 (major facilitator superfamily)
nrgi|743804232|ref|XP_010927137.1|0PREDICTED: organic cation/carnitine transporter 7 isoform X1 [Elaeis guineensis]
Swissprottr|Q940M4|OCT7_ARATH9.00E-176Organic cation/carnitine transporter 7
trEMBLtr|K4A922|K4A922_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si035378m}
TAIRAT3G130503.00E-175Major facilitator superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000146628924683367+
Transcript Sequence

Network for GWHGAAEX018072

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07690.15MFS_1333362.00E-31
PF07690.15MFS_13685149.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016021Cellular Componentintegral component of membrane
GO:0005887Cellular Componentintegral component of plasma membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.760
SRR2545915Juvenile tuber27.540
SRP108465SRR5643513five period of Gastrodia elata29.600
SRR5643514five period of Gastrodia elata26.180
SRR5643515five period of Gastrodia elata23.460
SRR5643524five period of Gastrodia elata24.880
SRR5643525five period of Gastrodia elata15.590
SRR5643528five period of Gastrodia elata14.730
SRR5643658five period of Gastrodia elata21.010
SRR5643659five period of Gastrodia elata19.750
SRR5643660five period of Gastrodia elata15.870
SRR5643661five period of Gastrodia elata20.030
SRR5643662five period of Gastrodia elata16.070
SRR5643663five period of Gastrodia elata21.820
SRR5643664five period of Gastrodia elata12.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.590
SRR6049655Rhizomagastrodiae_C368-T10_good_121.990
SRR6049656Rhizomagastrodiae_C368-T07_good_127.490
SRR6049657Rhizomagastrodiae_C368-T07_good_126.800
SRR6049658Rhizomagastrodiae_C368-T04_good_120.610
SRR6049659Rhizomagastrodiae_C368-T04_good_121.370
SRR6049660Rhizomagastrodiae_C368-T01_good_129.300
SRR6049661Rhizomagastrodiae_C368-T04_good_123.050
SRR6049662Rhizomagastrodiae_C368-T01_good_131.220
SRR6049663Rhizomagastrodiae_C368-T01_good_128.520
SRR6049664Rhizomagastrodiae_C368-T10_good_133.030
SRR6049665Rhizomagastrodiae_C368-T10_good_133.030
SRP279888GastroGastrodia elata tuber 10.54
JuvenJuvenile tuber28.54
Mother_GastroMother tuber of Gastrodia elata 9.06
Mother_JuvenMother tuber of Juvenile 13.17