Detail information of GWHGAAEX018078/evm.TU.scaffold_9.83


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695074446|ref|XP_009384426.1|2.21E-105PREDICTED: nicotianamine synthase 3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C7X5|NAS4_ARATH1.00E-100Probable nicotianamine synthase 4
trEMBLtr|M0T0D9|M0T0D9_MUSAM2.00E-100Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P21100_001}
TAIRAT1G564304.00E-100nicotianamine synthase 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000159898145991063-
Transcript Sequence

Network for GWHGAAEX018078

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03059.15NAS222959.30E-101
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030418Biological Processnicotianamine biosynthetic process
GO:0030410Molecular Functionnicotianamine synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.630
SRR2545915Juvenile tuber1.100
SRP108465SRR5643513five period of Gastrodia elata50.560
SRR5643514five period of Gastrodia elata20.540
SRR5643515five period of Gastrodia elata23.750
SRR5643524five period of Gastrodia elata18.720
SRR5643525five period of Gastrodia elata19.550
SRR5643528five period of Gastrodia elata51.750
SRR5643658five period of Gastrodia elata3.320
SRR5643659five period of Gastrodia elata2.890
SRR5643660five period of Gastrodia elata0.240
SRR5643661five period of Gastrodia elata1.230
SRR5643662five period of Gastrodia elata5.710
SRR5643663five period of Gastrodia elata5.390
SRR5643664five period of Gastrodia elata6.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1150.820
SRR6049655Rhizomagastrodiae_C368-T10_good_1348.660
SRR6049656Rhizomagastrodiae_C368-T07_good_1152.390
SRR6049657Rhizomagastrodiae_C368-T07_good_154.120
SRR6049658Rhizomagastrodiae_C368-T04_good_164.540
SRR6049659Rhizomagastrodiae_C368-T04_good_168.410
SRR6049660Rhizomagastrodiae_C368-T01_good_142.870
SRR6049661Rhizomagastrodiae_C368-T04_good_152.090
SRR6049662Rhizomagastrodiae_C368-T01_good_1340.150
SRR6049663Rhizomagastrodiae_C368-T01_good_191.550
SRR6049664Rhizomagastrodiae_C368-T10_good_1350.370
SRR6049665Rhizomagastrodiae_C368-T10_good_1350.370
SRP279888GastroGastrodia elata tuber 3.27
JuvenJuvenile tuber1.07
Mother_GastroMother tuber of Gastrodia elata 17.36
Mother_JuvenMother tuber of Juvenile 6.30