Gene detail

Detail information of GWHGAAEX018081/evm.TU.scaffold_9.93

Functional Annotation

Database	Orthologs	Annotation
COG	gi\|347756607\|ref\|YP_004864170.1\|	glutamyl peptidase [Candidatus Chloracidobacterium thermophilum B]
KOG	KOG2100	Dipeptidyl aminopeptidase
nr	gi\|743844177\|ref\|XP_010938262.1\|	PREDICTED: LOW QUALITY PROTEIN: probable glutamyl endopeptidase, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q10MJ1\|CGEP_ORYSJ	Probable glutamyl endopeptidase, chloroplastic (Precursor)
trEMBL	tr\|M0TUU7\|M0TUU7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P29950_001}
TAIR	AT2G47390	Prolyl oligopeptidase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000001	6402266	6480724	-

Transcript Sequence
>GWHTAAEX018081 ATGACAGCACACCAGTGGGCCCCACCACCTCGACTCCTGAGTTCTTTTCTGAAGTCCCTTTTTCTTCTTCGTCCCCAAAACTCCACGCTCGTTCGTTACTCTGCTCACGAGGCCTCGCTACTGCCATCTCCGGCGTTGATGACGTTCATACCTGCCAGTTCTACTTCCTGGCTTTTCCACATCAACTCTGTCGCCGCCTCCTTCGAAAATAGCTCGTGTGACCCCAATGGATCACGTGCTCCTCCTCCTCATTCCCTTTTGGAAAGTTCTCAGGCCGGCAGCGGAGATGAAGGATACCGCCTTCCTCCTAAGGAGATAAGAGATATTGTGGATGCATCTCCCCTTCCTGAATTGTCATTTTCCCCTCATAGAGATAAGATACTTTTCCTGAAGCGCAGGTCCTTGCCACCTTTGTCAGAGCTTGCAAGACCAGAAGACAAACTTGCTGGAATAAGGATTGATGGAAATTCTAATGCAAGGAGCAGAATGTCGTTCTATACTGGCATAGGGATTCATTCTTTATTAAATGATGGCACACTTGGCCCAGAGAAGGAAGTGCAAGGGTTTCCTGATGGAACTAAGATCAATTTTGTTAGCTGGTCAAAAGATGGACGTTACTTGGTTTTCAGCATTCGCACAGATGAGGAATATAACACCTGCAGCAAGTTGAGAGTATGGATTGCAGATGTTGATTCTGGAAAGGCTTGGCCACTTTTTCAGTCTAATGATATTTATTTGAATGCGATCTTTGACAACTTTGTTTGGGTTGACGATTCAACATTGTTGGTTTGCACTATTCCCATTGATCGCGGATCTCCTCCGAAGAAACCTCTGATTCCTCCTAGCCCAAAAATTCAATCGAATGAGAAACAGAACGTTGTTCAAATCAGAACTTTTCAAGATCTTCTGAAGGATGAATATGATGAAGATTTATTTGAGTACTATGCCATTACGCAGCTGGTATTGGTTTCATTAGATGGTACAACAAAACAAATTGGACCTCCCGCTGTTTATACATCAATTGAACCGTCACCTGATGGGAAATACATATTAGTGTCTCTTATCCACCGCCCATATTCATTCATTGTACCCTGGGAAATGTTTCCCAAGAAAGTAGATTTATGGACTGCTGATGGAAAGTTTATTAGAGAAATATGCGACTTACCTCTTGCTGAAGATATTCCTGTTGCTTTTAACAGTGTTCGTAGGGGGAAACGTTCAATTAGTTGGAGACCAGATAAGCCTTCAACGCTTTACTGGGCTGAGACACAAGATGGAGGTGATGCCAAAGTGGAAGTTTCACCACGTGATGTTGTTTATGTAGAACCAGCAGAGTTTGTGAACGGAGATGAACCTGAGATCTTGCATAAACTTGATCTCCGCTATGAATGTTTTCTCCTCTTATTTTATACAGTGGTATCTCCTGGTGATGATTCTCTTGCTCTGGTATATGAGTCTTGGTATAAAACTCGCTGTACAAAAACTTGGGTAATTTCGCCAGGCTGTAAGGAAGCAATCCCACGAATACTCTTTGATAGATCTTCGGAAGATGTCTATTCTGATCCAGGATCTCCGATGATGCGACGAACACCGGAAGGAACCTATGCTATTGCCAAAATAAGAAACCAAAATAAAGTTTACATTTTACTTAATGGGAGTGGTGCAACTCCAGAAGGGAATATTCCATTTCTAGATTTATTTGATATACACACAGGGAATAAAGAACGAATATGGGAAAGTGACAAAGAAAGATATTATGAAACAGTTGTTGCGCTGATGTCAGATTATAATGAAGATGAGTTGAGCATTGAGAAACTCAAGATACTTACTTCCAAAGAATCAAAAACTGAAAACACTCAATACTTGATTCAAAGTTGGCCAGATAAGAATGCTGTTCAAATTACAAAATTTCCTCACCCATATCCTCAACTGGCTCAGTTGCAGAAAGAGATGGTGAGATACCTGAGGAAGGATGGCGTTCAACTTACTGCAACACTTTATTTGCCTCCAGGATACAGCCCATCGAATGGGACCCTCCCATGTCTAGTATGGTCTTACCCTGGGGAATTTAACTACAAATTGAACTTTCAAAGAAGATTCTTTGCTATTTTATTTGGACCTACCATTCCAATTATTGGCGAAGGTGATCAAGAGGCAAATGACCGGTATGTGGAGCAATTGGTTTCTAGTGCAGAGGCTGCCGTTAATGAAATTATAAGGAGAGGGGTTGCTCACCCGAACAAAATTGCTGTTGGTGGTCATTCCTATGGCGCATTCATGACGGCTAATCTTCTTGCACATGCTCCTCATCTTTTCTGCTGTGGAATTGCACGGTCAGGGGCATACAATAGGACCCTCACTCCTTTTGGATTTCAGAATGAAGACAGAACATTATGGGAGGCTACCAATACATATGTTGAAATGAGCCCTTTCATGTCAGCAAACAAAGTTAAGAAGCCACTTTTACTTATACACGGAGAAGAGGATGAAAATCCTGGAACATTCACAATGCAGTCAGATCGCTTCTTCAATGCATTAAAGGGTCATGGTGCGCTCTGTCGTTCGGTTATATTGCCACTTGAAAGTCATTTTTATTCTGCTAGAGAAAGCATCATGCATGTCCTTTGGGAGACTGATAGGTGGCTACAGAAGTACTGTGTTGATAATCCTGACAAATTCACAGATTTGCATGATTCCAAAATTGAAGACCCAAGTAATCTGTTATCTGCCAGTGGAGGATTGGCTGCCAGTGAAGCACATGAAAATGATGCATCTAATCCTTCAATGAGGTCACTGTTGTGGTAA

Network for GWHGAAEX018081

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00326.20	Peptidase_S9	732	885	4.80E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0008236	Molecular Function	serine-type peptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.510
SRP064423	SRR2545915	Juvenile tuber	6.090
SRP108465	SRR5643513	five period of Gastrodia elata	1.600
	SRR5643514	five period of Gastrodia elata	1.800
	SRR5643515	five period of Gastrodia elata	1.920
	SRR5643524	five period of Gastrodia elata	2.050
	SRR5643525	five period of Gastrodia elata	2.190
	SRR5643528	five period of Gastrodia elata	2.460
	SRR5643658	five period of Gastrodia elata	2.570
	SRR5643659	five period of Gastrodia elata	1.580
	SRR5643660	five period of Gastrodia elata	1.500
	SRR5643661	five period of Gastrodia elata	1.650
	SRR5643662	five period of Gastrodia elata	1.760
	SRR5643663	five period of Gastrodia elata	2.550
	SRR5643664	five period of Gastrodia elata	2.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.190
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.180
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.330
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.310
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.760
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.580
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.580
SRP279888	Gastro	Gastrodia elata tuber	2.28
	Juven	Juvenile tuber	3.31
	Mother_Gastro	Mother tuber of Gastrodia elata	2.55
	Mother_Juven	Mother tuber of Juvenile	3.78