Detail information of GWHGAAEX018086/evm.TU.scaffold_9.109
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|432330601|ref|YP_007248744.1| | 4.00E-80 | Zn-dependent oligopeptidase [Methanoregula formicica SMSP] |
| KOG | KOG2089 | 0 | Metalloendopeptidase family - saccharolysin & thimet oligopeptidase |
| nr | gi|743822545|ref|XP_010932305.1| | 0 | PREDICTED: probable thimet oligopeptidase [Elaeis guineensis] |
| Swissprot | tr|F4HTQ1|MPRO1_ARATH | 0 | Probable thimet oligopeptidase |
| trEMBL | tr|A0A067GQN6|A0A067GQN6_CITSI | 0 | Uncharacterized protein {ECO:0000313|EMBL:KDO82043.1} |
| TAIR | AT1G67700 | 0 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000001 | 7453052 | 7557353 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX018086
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01432.19 | Peptidase_M3 | 251 | 691 | 5.40E-92 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01392 | THOP1 | Renin-angiotensin system | map04614 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004222 | Molecular Function | metalloendopeptidase activity |
| GO:0008237 | Molecular Function | metallopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.720 |
| SRR2545915 | Juvenile tuber | 9.620 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 6.790 |
| SRR5643514 | five period of Gastrodia elata | 6.670 | |
| SRR5643515 | five period of Gastrodia elata | 5.340 | |
| SRR5643524 | five period of Gastrodia elata | 5.960 | |
| SRR5643525 | five period of Gastrodia elata | 1.870 | |
| SRR5643528 | five period of Gastrodia elata | 2.630 | |
| SRR5643658 | five period of Gastrodia elata | 2.380 | |
| SRR5643659 | five period of Gastrodia elata | 6.090 | |
| SRR5643660 | five period of Gastrodia elata | 6.710 | |
| SRR5643661 | five period of Gastrodia elata | 5.490 | |
| SRR5643662 | five period of Gastrodia elata | 5.690 | |
| SRR5643663 | five period of Gastrodia elata | 5.850 | |
| SRR5643664 | five period of Gastrodia elata | 4.860 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.250 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 9.940 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.370 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.790 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.460 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.760 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.920 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.570 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.570 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.32 |
| Juven | Juvenile tuber | 6.75 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.07 | |
| Mother_Juven | Mother tuber of Juvenile | 4.57 |