Detail information of GWHGAAEX018087/evm.TU.scaffold_9.110


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG14741.00E-136Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins
nrgi|672160375|ref|XP_008799968.1|0PREDICTED: transcription factor GTE9-like isoform X2 [Phoenix dactylifera]
Swissprottr|Q93YS6|GTE9_ARATH3.00E-136Transcription factor GTE9
trEMBLtr|B9RAK3|B9RAK3_RICCO0Bromodomain-containing protein, putative {ECO:0000313|EMBL:EEF51830.1}
TAIRAT5G142701.00E-136bromodomain and extraterminal domain protein 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000176297787689602-
Transcript Sequence

Network for GWHGAAEX018087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00439.24Bromodomain1842681.50E-20
PF17035.4BET3243861.50E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms89.060
SRR2545915Juvenile tuber81.650
SRP108465SRR5643513five period of Gastrodia elata34.040
SRR5643514five period of Gastrodia elata28.130
SRR5643515five period of Gastrodia elata33.900
SRR5643524five period of Gastrodia elata27.830
SRR5643525five period of Gastrodia elata24.240
SRR5643528five period of Gastrodia elata27.270
SRR5643658five period of Gastrodia elata32.010
SRR5643659five period of Gastrodia elata34.490
SRR5643660five period of Gastrodia elata41.190
SRR5643661five period of Gastrodia elata33.300
SRR5643662five period of Gastrodia elata45.220
SRR5643663five period of Gastrodia elata41.660
SRR5643664five period of Gastrodia elata48.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.510
SRR6049655Rhizomagastrodiae_C368-T10_good_131.180
SRR6049656Rhizomagastrodiae_C368-T07_good_142.000
SRR6049657Rhizomagastrodiae_C368-T07_good_158.430
SRR6049658Rhizomagastrodiae_C368-T04_good_165.970
SRR6049659Rhizomagastrodiae_C368-T04_good_176.310
SRR6049660Rhizomagastrodiae_C368-T01_good_154.220
SRR6049661Rhizomagastrodiae_C368-T04_good_158.840
SRR6049662Rhizomagastrodiae_C368-T01_good_136.240
SRR6049663Rhizomagastrodiae_C368-T01_good_145.490
SRR6049664Rhizomagastrodiae_C368-T10_good_135.240
SRR6049665Rhizomagastrodiae_C368-T10_good_135.240
SRP279888GastroGastrodia elata tuber 66.24
JuvenJuvenile tuber80.73
Mother_GastroMother tuber of Gastrodia elata 61.05
Mother_JuvenMother tuber of Juvenile 91.66