Detail information of GWHGAAEX018090/evm.TU.scaffold_9.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428210184|ref|YP_007094537.1|7.00E-33phage shock protein A (PspA) family protein [Chroococcidiopsis thermalis PCC 7203]
nrgi|586780776|ref|XP_006858881.1|7.98E-88hypothetical protein AMTR_s00066p00198600 [Amborella trichopoda]
Swissprottr|Q8S0J7|IM30_ORYSJ1.00E-82Probable membrane-associated 30 kDa protein, chloroplastic (Precursor)
trEMBLtr|U5DID9|U5DID9_AMBTC3.00E-88Uncharacterized protein {ECO:0000313|EMBL:ERN20348.1}
TAIRAT1G652602.00E-73plastid transcriptionally active 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000184699368499078+
Transcript Sequence

Network for GWHGAAEX018090

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04012.11PspA_IM302952.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.270
SRR2545915Juvenile tuber49.550
SRP108465SRR5643513five period of Gastrodia elata52.090
SRR5643514five period of Gastrodia elata50.560
SRR5643515five period of Gastrodia elata50.840
SRR5643524five period of Gastrodia elata51.980
SRR5643525five period of Gastrodia elata32.190
SRR5643528five period of Gastrodia elata36.890
SRR5643658five period of Gastrodia elata36.880
SRR5643659five period of Gastrodia elata44.410
SRR5643660five period of Gastrodia elata45.400
SRR5643661five period of Gastrodia elata53.860
SRR5643662five period of Gastrodia elata56.710
SRR5643663five period of Gastrodia elata52.290
SRR5643664five period of Gastrodia elata52.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.680
SRR6049655Rhizomagastrodiae_C368-T10_good_146.440
SRR6049656Rhizomagastrodiae_C368-T07_good_153.030
SRR6049657Rhizomagastrodiae_C368-T07_good_153.110
SRR6049658Rhizomagastrodiae_C368-T04_good_147.220
SRR6049659Rhizomagastrodiae_C368-T04_good_167.090
SRR6049660Rhizomagastrodiae_C368-T01_good_149.610
SRR6049661Rhizomagastrodiae_C368-T04_good_155.440
SRR6049662Rhizomagastrodiae_C368-T01_good_160.130
SRR6049663Rhizomagastrodiae_C368-T01_good_154.840
SRR6049664Rhizomagastrodiae_C368-T10_good_147.940
SRR6049665Rhizomagastrodiae_C368-T10_good_147.940
SRP279888GastroGastrodia elata tuber 85.47
JuvenJuvenile tuber62.44
Mother_GastroMother tuber of Gastrodia elata 71.27
Mother_JuvenMother tuber of Juvenile 55.85