Detail information of GWHGAAEX018104/evm.TU.scaffold_9.151


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|390939653|ref|YP_006403390.1|6.00E-28serine/threonine protein kinase [Sulfurospirillum barnesii SES-3]
KOGKOG05857.00E-169Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases
nrgi|743872230|ref|XP_010906488.1|0PREDICTED: serine/threonine-protein kinase GRIK2-like isoform X1 [Elaeis guineensis]
Swissprottr|Q5HZ38|GRIK2_ARATH5.00E-168Serine/threonine-protein kinase GRIK2
trEMBLtr|M0RXB7|M0RXB7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P05590_001}
TAIRAT5G605507.00E-169geminivirus rep interacting kinase 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000194652279503723-
Transcript Sequence

Network for GWHGAAEX018104

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1023622.10E-56
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-LKB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.120
SRR2545915Juvenile tuber47.760
SRP108465SRR5643513five period of Gastrodia elata27.870
SRR5643514five period of Gastrodia elata33.040
SRR5643515five period of Gastrodia elata31.800
SRR5643524five period of Gastrodia elata24.730
SRR5643525five period of Gastrodia elata49.620
SRR5643528five period of Gastrodia elata39.270
SRR5643658five period of Gastrodia elata47.060
SRR5643659five period of Gastrodia elata72.870
SRR5643660five period of Gastrodia elata82.500
SRR5643661five period of Gastrodia elata63.520
SRR5643662five period of Gastrodia elata59.110
SRR5643663five period of Gastrodia elata58.820
SRR5643664five period of Gastrodia elata62.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_136.980
SRR6049655Rhizomagastrodiae_C368-T10_good_133.930
SRR6049656Rhizomagastrodiae_C368-T07_good_136.120
SRR6049657Rhizomagastrodiae_C368-T07_good_129.620
SRR6049658Rhizomagastrodiae_C368-T04_good_134.900
SRR6049659Rhizomagastrodiae_C368-T04_good_130.480
SRR6049660Rhizomagastrodiae_C368-T01_good_132.440
SRR6049661Rhizomagastrodiae_C368-T04_good_131.640
SRR6049662Rhizomagastrodiae_C368-T01_good_147.550
SRR6049663Rhizomagastrodiae_C368-T01_good_137.140
SRR6049664Rhizomagastrodiae_C368-T10_good_141.070
SRR6049665Rhizomagastrodiae_C368-T10_good_141.070
SRP279888GastroGastrodia elata tuber 95.41
JuvenJuvenile tuber46.83
Mother_GastroMother tuber of Gastrodia elata 54.33
Mother_JuvenMother tuber of Juvenile 36.98