Detail information of GWHGAAEX018109/evm.TU.scaffold_9.165


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10920Ypt/Rab-specific GTPase-activating protein GYP1
nrgi|743762624|ref|XP_010909061.1|0PREDICTED: TBC1 domain family member 22B-like isoform X1 [Elaeis guineensis]
trEMBLtr|M0RSD0|M0RSD0_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P15000_001}
TAIRAT2G307100Ypt/Rab-GAP domain of gyp1p superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000011036098710399242-
Transcript Sequence

Network for GWHGAAEX018109

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC1704147.00E-53
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.010
SRR2545915Juvenile tuber47.100
SRP108465SRR5643513five period of Gastrodia elata26.410
SRR5643514five period of Gastrodia elata24.960
SRR5643515five period of Gastrodia elata21.610
SRR5643524five period of Gastrodia elata24.790
SRR5643525five period of Gastrodia elata28.560
SRR5643528five period of Gastrodia elata25.950
SRR5643658five period of Gastrodia elata29.170
SRR5643659five period of Gastrodia elata22.250
SRR5643660five period of Gastrodia elata22.020
SRR5643661five period of Gastrodia elata20.230
SRR5643662five period of Gastrodia elata19.210
SRR5643663five period of Gastrodia elata22.320
SRR5643664five period of Gastrodia elata20.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.520
SRR6049655Rhizomagastrodiae_C368-T10_good_137.600
SRR6049656Rhizomagastrodiae_C368-T07_good_130.610
SRR6049657Rhizomagastrodiae_C368-T07_good_131.030
SRR6049658Rhizomagastrodiae_C368-T04_good_129.360
SRR6049659Rhizomagastrodiae_C368-T04_good_130.180
SRR6049660Rhizomagastrodiae_C368-T01_good_128.440
SRR6049661Rhizomagastrodiae_C368-T04_good_130.580
SRR6049662Rhizomagastrodiae_C368-T01_good_126.740
SRR6049663Rhizomagastrodiae_C368-T01_good_126.340
SRR6049664Rhizomagastrodiae_C368-T10_good_131.280
SRR6049665Rhizomagastrodiae_C368-T10_good_131.280
SRP279888GastroGastrodia elata tuber 23.19
JuvenJuvenile tuber31.95
Mother_GastroMother tuber of Gastrodia elata 24.87
Mother_JuvenMother tuber of Juvenile 23.08