Detail information of GWHGAAEX018111/evm.TU.scaffold_9.168


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720039331|ref|XP_010268265.1|6.41E-154PREDICTED: probable transcription factor PosF21 [Nelumbo nucifera]
Swissprottr|Q04088|POF21_ARATH1.00E-125Probable transcription factor PosF21
trEMBLtr|A0A068VB62|A0A068VB62_COFCA9.00E-152Coffea canephora
TAIRAT1G060708.00E-132Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000011051413910534377+
Transcript Sequence

Network for GWHGAAEX018111

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_12222773.90E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.250
SRR2545915Juvenile tuber20.790
SRP108465SRR5643513five period of Gastrodia elata18.000
SRR5643514five period of Gastrodia elata16.220
SRR5643515five period of Gastrodia elata21.570
SRR5643524five period of Gastrodia elata18.810
SRR5643525five period of Gastrodia elata19.890
SRR5643528five period of Gastrodia elata26.180
SRR5643658five period of Gastrodia elata17.810
SRR5643659five period of Gastrodia elata15.270
SRR5643660five period of Gastrodia elata16.030
SRR5643661five period of Gastrodia elata18.770
SRR5643662five period of Gastrodia elata27.870
SRR5643663five period of Gastrodia elata19.700
SRR5643664five period of Gastrodia elata17.120
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.480
SRR6049655Rhizomagastrodiae_C368-T10_good_125.270
SRR6049656Rhizomagastrodiae_C368-T07_good_118.750
SRR6049657Rhizomagastrodiae_C368-T07_good_116.710
SRR6049658Rhizomagastrodiae_C368-T04_good_118.390
SRR6049659Rhizomagastrodiae_C368-T04_good_119.740
SRR6049660Rhizomagastrodiae_C368-T01_good_121.880
SRR6049661Rhizomagastrodiae_C368-T04_good_118.820
SRR6049662Rhizomagastrodiae_C368-T01_good_117.760
SRR6049663Rhizomagastrodiae_C368-T01_good_121.280
SRR6049664Rhizomagastrodiae_C368-T10_good_118.970
SRR6049665Rhizomagastrodiae_C368-T10_good_118.970
SRP279888GastroGastrodia elata tuber 20.36
JuvenJuvenile tuber13.25
Mother_GastroMother tuber of Gastrodia elata 35.78
Mother_JuvenMother tuber of Juvenile 28.14