Detail information of GWHGAAEX018112/evm.TU.scaffold_9.171


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108762920|ref|YP_633223.1|4.00E-32aquaporin Z [Myxococcus xanthus DK 1622]
KOGKOG02236.00E-178Aquaporin (major intrinsic protein family)
nrgi|672127986|ref|XP_008787474.1|0PREDICTED: probable aquaporin PIP1-2 [Phoenix dactylifera]
Swissprottr|Q9XF59|PIP12_MAIZE0Aquaporin PIP1-2
trEMBLtr|B4FQW8|B4FQW8_MAIZE0Uncharacterized protein {ECO:0000313|EMBL:ACF84511.1, ECO:0000313|EnsemblPlants:AC209208.3_FGP002}
TAIRAT2G459606.00E-178plasma membrane intrinsic protein 1B

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000011065344010656325+
Transcript Sequence

Network for GWHGAAEX018112

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP452741.90E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms378.220
SRR2545915Juvenile tuber1164.280
SRP108465SRR5643513five period of Gastrodia elata797.420
SRR5643514five period of Gastrodia elata876.010
SRR5643515five period of Gastrodia elata620.930
SRR5643524five period of Gastrodia elata695.650
SRR5643525five period of Gastrodia elata787.050
SRR5643528five period of Gastrodia elata651.610
SRR5643658five period of Gastrodia elata1304.690
SRR5643659five period of Gastrodia elata652.890
SRR5643660five period of Gastrodia elata580.580
SRR5643661five period of Gastrodia elata699.690
SRR5643662five period of Gastrodia elata618.050
SRR5643663five period of Gastrodia elata814.930
SRR5643664five period of Gastrodia elata684.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1600.970
SRR6049655Rhizomagastrodiae_C368-T10_good_1660.480
SRR6049656Rhizomagastrodiae_C368-T07_good_1718.720
SRR6049657Rhizomagastrodiae_C368-T07_good_1600.400
SRR6049658Rhizomagastrodiae_C368-T04_good_1380.500
SRR6049659Rhizomagastrodiae_C368-T04_good_1272.790
SRR6049660Rhizomagastrodiae_C368-T01_good_1440.590
SRR6049661Rhizomagastrodiae_C368-T04_good_1586.740
SRR6049662Rhizomagastrodiae_C368-T01_good_1568.100
SRR6049663Rhizomagastrodiae_C368-T01_good_1426.550
SRR6049664Rhizomagastrodiae_C368-T10_good_1586.360
SRR6049665Rhizomagastrodiae_C368-T10_good_1586.360
SRP279888GastroGastrodia elata tuber 1,043.48
JuvenJuvenile tuber996.07
Mother_GastroMother tuber of Gastrodia elata 372.84
Mother_JuvenMother tuber of Juvenile 395.62