Detail information of GWHGAAEX018117/evm.TU.scaffold_9.182


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|328545698|ref|YP_004305807.1|6.00E-12ferredoxin, 2fe-2s fdii electron transport iron-sulfur protein [Polymorphum gilvum SL003B-26A1]
KOGKOG33091.00E-63Ferredoxin
nrgi|719963350|ref|XP_010249447.1|7.34E-74PREDICTED: adrenodoxin-like protein, mitochondrial [Nelumbo nucifera]
trEMBLtr|M0T1P4|M0T1P4_MUSAM3.00E-70Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P25690_001}
TAIRAT3G074801.00E-632Fe-2S ferredoxin-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000011118744611188577+
Transcript Sequence

Network for GWHGAAEX018117

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0009055Molecular Functionelectron carrier activity
GO:0051536Molecular Functioniron-sulfur cluster binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.910
SRR2545915Juvenile tuber32.100
SRP108465SRR5643513five period of Gastrodia elata63.120
SRR5643514five period of Gastrodia elata78.890
SRR5643515five period of Gastrodia elata67.790
SRR5643524five period of Gastrodia elata80.130
SRR5643525five period of Gastrodia elata37.240
SRR5643528five period of Gastrodia elata46.440
SRR5643658five period of Gastrodia elata41.360
SRR5643659five period of Gastrodia elata50.520
SRR5643660five period of Gastrodia elata46.950
SRR5643661five period of Gastrodia elata53.690
SRR5643662five period of Gastrodia elata45.380
SRR5643663five period of Gastrodia elata47.150
SRR5643664five period of Gastrodia elata42.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.160
SRR6049655Rhizomagastrodiae_C368-T10_good_1135.800
SRR6049656Rhizomagastrodiae_C368-T07_good_169.910
SRR6049657Rhizomagastrodiae_C368-T07_good_147.270
SRR6049658Rhizomagastrodiae_C368-T04_good_142.140
SRR6049659Rhizomagastrodiae_C368-T04_good_138.000
SRR6049660Rhizomagastrodiae_C368-T01_good_144.880
SRR6049661Rhizomagastrodiae_C368-T04_good_138.220
SRR6049662Rhizomagastrodiae_C368-T01_good_161.590
SRR6049663Rhizomagastrodiae_C368-T01_good_159.540
SRR6049664Rhizomagastrodiae_C368-T10_good_189.220
SRR6049665Rhizomagastrodiae_C368-T10_good_189.220
SRP279888GastroGastrodia elata tuber 48.05
JuvenJuvenile tuber60.70
Mother_GastroMother tuber of Gastrodia elata 45.78
Mother_JuvenMother tuber of Juvenile 49.40