Gene detail

Detail information of GWHGAAEX018130/evm.TU.scaffold_90.5

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1904	1.00E-83	Transcription coactivator
nr	gi\|743834477\|ref\|XP_010935541.1\|	1.58E-103	PREDICTED: ENHANCER OF AG-4 protein 2-like [Elaeis guineensis]
Swissprot	tr\|Q9XER9\|HUA2_ARATH	3.00E-84	ENHANCER OF AG-4 protein 2
trEMBL	tr\|M0SN52\|M0SN52_MUSAM	1.00E-95	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P11870_001}
TAIR	AT5G23150	1.00E-83	Tudor/PWWP/MBT domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000097	182865	190453	+

Transcript Sequence
>GWHTAAEX018130 ATGTCTGGTCATGGAGGTTCGTTTTCGGCTAAAAGATCAGTTATTAAAGATGGGAAAGGTATTATCTCCAAAAACTTCATTAAAGTTGAACCATCACTGCTCACAACCGGGGGAAGTAGTAACAAGAATTTAAGTTTTATAATGTCTGAATCTTCAGACGTTGATAATAGCATTGCATCCACAGAGGAGCTATATGATAGCATGAATCCACCACTAGTAATGAAGTCGTGCAAGGGATCAAGTGATGTTTTAAAATATTTGTCCAATAGGCCTGTAAACATAAGAAAGAAGAGCACTAGTGATACTAATGGAATTAATTTTAAACACAATAAGCCTTTTGCTACCTTTACAAAGAAGAGCGTTAGCTGTACTAAGGGAATGGATTTTAAACACAATAAATCTGTTACTTCTTCTTTGCCTAATAGAAGAAAGGCATTGAAGTTATTAGAAGATGCTGATTGTGAAGAACATAAAACTCCAATTCACCATGTACCTGCTGTCAAATTGTGGAGAGAATATTCAGGCACATTTGATTCTGAAAGAGAATCTCATATGCAAACAGAAACTTGCAGAGATTTATTTAAAAATGCTTCTCTTTCAGATGCGAGTACGATATTTGTGGAAAATATGAGCTCTGTAGTTGATGAGAGGTCTAACAATGTCTCAGGGAGCATGGAAAAGATGGAGAGTTGCTATCCAACTTCCAGTTGCTATTCAACTTCCAGTCTAAGTAATGTTCAAGTGCCAAAAAGTTCTGAAAACTTCCTTGCATCTAGAAATTATGTGAAGCAAGAAAAGTGTAAGTCTACTACTTTAAATGGTAGAACAGCCAGTAATGAACCGGAAAATCCATTTGATACTCATACTTCCAAGTTGGTGAGTTTCAATAATCTCAAGCATCAGGATAAAGAAACAGTTCTTGATAGTGCCCAATTAGGCGACTCGTTCAAAGATTCTGGAATGGTGCACATTTCTCGTGGTCCTTCAACTGTGCAAAATCATCTCTCTTTATTAGAAAAATCTAGGGCTCTACCAAAATCGTGTTTTTCTGTGACTAATGTTGCTGAGAACAAGTCCAATGTTAATTTTTCAGCTGATTGCAATGCTGTGAAAGATTCTTCAATAGGACAAAGATCTGATATCACTAGGGAAGCTACTTCTGCTGATTCTGATGATAACAAATTGACAGATTCGGCTACTTCATTGAGACATCTTATTGCAGCTGCTCAAGCTAAAAAGAGGCAGGCACATTCTCACCAGTTACTTGATGGAAATGGTACTCCTGGTTCATCTTTTTCTCCACAACATGTCAGTAGGGGGAGCCCCAATCAAATATCCAACATGCAAACATTTTCATCTGGAGGTCTTTTTCAGAAAGATAAGAAATGTTTTCAAACTGTTATATCTGGTGAACCTCATCTGGCCTCACATCCGTTTCTTCCTGTGAAACAAGGAGAGCGTGAAGATTATGATCATAGACATAGTGAAGGAAACTGGCATCCCACTGATTCTTCTAGCAAGACAACTGAAGCTGAAGCTGCTCGAGATTCTTTGGAAGGAATGATTGAAACACTATCACGAACTAGGGACAGTATTAGACGTGCAACCCGTCATGCTATTGACTGTGCTAAGTATGGTATTGCAAATGAGGTTGTTGAACTTCTTATCTGCAAATTGGAAAGTGAGCCTAGCCTTCCGCGGAGGATAGACCTGTTCTTCCTTGTGGATTCTATTACCCAATGTTCACATACTCAAAAAGGAATTTCGGGGGCAACATATGTTCCAGTTGTCCAAGCAGCTTTGCCACGCCTATTATGTGCTGCTGCGCCTCCCGGAGCTTCTGCTCAAGAGAATAGACGCCAATGCCTTAAGGTTTTGAAGTTATGGATAGAGAGGAGAGTTCTGCCAGAATATTTTCTCCGTCATTATGTGAATAAAATTGAGGGTCACAATGATCATTTAAATAATGAGTTTTCTCATAAAGCTCCATGTGCTGAACAATCTGTTGATAGCCCAACTTTGGAAATGGAAAGCTTACTTGTTGATCAGTATGGAAGCAACACAACATTCCTGTTTCCTGGAATTCTTTCTGCGTATTCTTTGCATGGTGATGATGATTTTCCATGTAGTCCATGCAATGGTACAGCAGAATGCTCTTCACATGAAGCATGTGGTGTTTCTCAAGTGCATCTTGGTTCTGAAGATCATCCATTGGAAGCACATCACCATGCATTGGATTATATAGAGAATGAGATAGAAATGGAAGATGCAATTACAATATCTCCAGATGAGGGAACTATAAGAAGGGATTTTTCCCCAAATCCTGCACTTCATCAGGAGCATTGCTGGGCTACCGAACCTACTACATGTGGCAATCCAAATGAACCGCTTGCATCAGAAAATTCCACTCTCCTTTTTTTAGATCCTCCTCCCACTACTCCACCATTGCCTCCTTCACCGCCTCCGCTAACACCTCCGCCTCCTTCATCGCCCCCACCCTTACCACCATTTCAACCACCGTCAACGGCCCAACCCCCACCCCCACCCCCACTTCCATTTCCACCTGATTTATCTGCAGTAATATCTCTCACCCAATCACAATTGCTTTCTTCCTCTCCATTTAATCTTTCCCTTCAACAGGAGTACTGCAGGATGGAACATGATAATCATTTGCTCCAGTCAATTGGCAATAATTTTCATGAAGACTCTACTGTTGGAGCAAAAAATAAAGCAGCTGTGCGACAATCTCCTAATATTTTAGTACCTGAAGTTGGTAGTTCAAAGTCCATGCCCAGCTTGGAATTTTCCCGACCATTTGAAAATGTGCAACATGGCGCACATTCAGCACATCAAGTTTCTTTCGACAGTCAATTGTTTCAAGAGGGCAGTAAAACTATCCGGCAGATGCCTACTTGTTCTGCTCTTCCATCACTGAAAATCCGAAACCACTCCATTCCAAGCTCTCGAATCTCTTTAAATAATCTATCTCATGGAAAGTTCACACATCGGAACCATTTACAGCAGAAATGTGGTCCTTATACCACCTCAAGTTTTCCAATTGGTAAAAGGAAGCATGGTACAATGGGGCATTGGATGCCACATTCTAATGATGCCAGTCAAGTTAATTCCGATGCTTTGAATATAAGAAGGAAAATATCATGTTCAAGTGCACCCTTTGAAACATATGAAAATTGCGGAGTAAACATGGAAAGAAGATTATCGGCTTCTATTGATTATCATCCGCCACATTATTCTGCAACATCCCAAACTTCGTTGCCAGGTTCTCATTTTCCTTGTATGAATTTTCAGAGGCCCACATAA

Network for GWHGAAEX018130

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04818.12	CTD_bind	568	634	3.40E-07

Protein Sequence

>GWHPAAEX018130
MSGHGGSFSAKRSVIKDGKGIISKNFIKVEPSLLTTGGSSNKNLSFIMSESSDVDNSIASTEELYDSMNPPLVMKSCKGSSDVLKYLSNRPVNIRKKSTSDTNGINFKHNKPFATFTKKSVSCTKGMDFKHNKSVTSSLPNRRKALKLLEDADCEEHKTPIHHVPAVKLWREYSGTFDSERESHMQTETCRDLFKNASLSDASTIFVENMSSVVDERSNNVSGSMEKMESCYPTSSCYSTSSLSNVQVPKSSENFLASRNYVKQEKCKSTTLNGRTASNEPENPFDTHTSKLVSFNNLKHQDKETVLDSAQLGDSFKDSGMVHISRGPSTVQNHLSLLEKSRALPKSCFSVTNVAENKSNVNFSADCNAVKDSSIGQRSDITREATSADSDDNKLTDSATSLRHLIAAAQAKKRQAHSHQLLDGNGTPGSSFSPQHVSRGSPNQISNMQTFSSGGLFQKDKKCFQTVISGEPHLASHPFLPVKQGEREDYDHRHSEGNWHPTDSSSKTTEAEAARDSLEGMIETLSRTRDSIRRATRHAIDCAKYGIANEVVELLICKLESEPSLPRRIDLFFLVDSITQCSHTQKGISGATYVPVVQAALPRLLCAAAPPGASAQENRRQCLKVLKLWIERRVLPEYFLRHYVNKIEGHNDHLNNEFSHKAPCAEQSVDSPTLEMESLLVDQYGSNTTFLFPGILSAYSLHGDDDFPCSPCNGTAECSSHEACGVSQVHLGSEDHPLEAHHHALDYIENEIEMEDAITISPDEGTIRRDFSPNPALHQEHCWATEPTTCGNPNEPLASENSTLLFLDPPPTTPPLPPSPPPLTPPPPSSPPPLPPFQPPSTAQPPPPPPLPFPPDLSAVISLTQSQLLSSSPFNLSLQQEYCRMEHDNHLLQSIGNNFHEDSTVGAKNKAAVRQSPNILVPEVGSSKSMPSLEFSRPFENVQHGAHSAHQVSFDSQLFQEGSKTIRQMPTCSALPSLKIRNHSIPSSRISLNNLSHGKFTHRNHLQQKCGPYTTSSFPIGKRKHGTMGHWMPHSNDASQVNSDALNIRRKISCSSAPFETYENCGVNMERRLSASIDYHPPHYSATSQTSLPGSHFPCMNFQRPT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	30.560
SRP064423	SRR2545915	Juvenile tuber	22.290
SRP108465	SRR5643513	five period of Gastrodia elata	15.270
	SRR5643514	five period of Gastrodia elata	14.260
	SRR5643515	five period of Gastrodia elata	14.140
	SRR5643524	five period of Gastrodia elata	14.410
	SRR5643525	five period of Gastrodia elata	13.040
	SRR5643528	five period of Gastrodia elata	14.910
	SRR5643658	five period of Gastrodia elata	18.420
	SRR5643659	five period of Gastrodia elata	12.450
	SRR5643660	five period of Gastrodia elata	11.330
	SRR5643661	five period of Gastrodia elata	11.370
	SRR5643662	five period of Gastrodia elata	12.550
	SRR5643663	five period of Gastrodia elata	12.680
	SRR5643664	five period of Gastrodia elata	12.420
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.670
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.060
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	22.560
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	19.830
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	13.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.160
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.160
SRP279888	Gastro	Gastrodia elata tuber	11.63
	Juven	Juvenile tuber	16.48
	Mother_Gastro	Mother tuber of Gastrodia elata	15.62
	Mother_Juven	Mother tuber of Juvenile	19.03