Gene detail

Detail information of GWHGAAEX018131/evm.TU.scaffold_90.6

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743863868\|ref\|XP_010943895.1\|	0	PREDICTED: protein EXECUTER 1, chloroplastic isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q93YW0\|EXEC1_ARATH	4.00E-87	Protein EXECUTER 1, chloroplastic (Precursor)
trEMBL	tr\|A0A068TM24\|A0A068TM24_COFCA	1.00E-177	Coffea canephora
TAIR	AT4G33630	8.00E-70	Protein of unknown function (DUF3506)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000097	209268	257994	-

Transcript Sequence
>GWHTAAEX018131 AAAAAGCGTTTTCTATCTTTTTAAATATCATCGTCTAGATACTCAGGCAGGTCTCCCTGTGAATGGCATCGATACAAGCTAATCTGCTGCCATCGAGTGCTCTTTGCCACACAGATTCGAACCCTACCCGTTCTCCTTCTCAGTCCCGGAACTTTGTTGCTGCGTCACCTCGATGTCCGCTTTCCGCTCTCAAATGGTCGGATTCGGGGCTCTGTCGGTGCCGCAATCCTCTTTCGGGGTCGCCATCGCCGGGCGACGATGGCGGTTGGAATAGCTTGGACTCGATTTTACATGATGTCGTGAAAAGCGCTTTGAAAAAACTGGAAGATTGCATGAATTCATTTCGTAAGCTGTCTGGCAGGGGCGGCTTGAACCCTGAGAATGCGGACGCGGCCCGGAATGGTGAGGAAACTCTGGTAGGGGAAGATGAAGATGAGAAGGACTGGGACTGGAAGCGGTGGAAGCAGCATTTTCTTGAGATTGAAGAGAACAAGTGGATTGCCTTAGCGTTGAAGATGCAATTGAGCGATGCTGTTTCTAGAGATGATTATGAAGCAGCTGCCAAGTTCAAATTAGCACTCCATGCTGCCAACAGAAGTGATACCGTAGGCTCTGCAATAGTAGATTACAATAAAGCGATTGCAGAGGAGAGGTACAATGATGCAGCCTTTCTTCGTGACAATGCTGGCACAGGATTGTTAGGGTGGTGGTCTGGCATTTCAGAAGATGGTGTTGATATCTTTGGTCGAATTATTCATATAAGTGCTGAACATGGAAAATACGTGGCTAGAAACTATAGTTCAAGACAGCTTGCTATGTCTAGACCCGGTTTCCCATTATTTGAAGTTTATTTCACTTACGGTAGTGAAGGTTATAAGAAGCAGGCAGTCTATTTAAAACAAAACATTGGGCGTACTACAAATATGTCAATGAAATCTGCAAACAATTCTGCTCAGAGCTTAAATCAAAGCAATGGCTTAACTGAAGAACCTAGGGAAATGTCTTCCGAAGTTGATGATAATTCCAATTGGATTGATGGGCTGATAATAAAGAGCAATGAAGAAAGTGATGAAGAAACGCAGGATTCTGAGGAAAAATATATTAAAGCAGAAAGCGACTTAGAAGAAACAGAAATGGTTAGTAGAGATGAAGCCAGCAATGCAACTGAAGAGCAAAATCAAGTCTCTATGAAATTCGTGATAAGTACTCTTTTGAAAAACATGGCAGCTGATGTTCCTCATAGGGACCTTGTTCGTGTGCCAGCTGAGTTAGAGATAAGGGATCATTTATCCTTTTCTTTTTCTGTCAAGAAGGAGGATTTGCAAAGTGAAACTGAGACAGGACATGGCCGGCAGACCAAAAGTGTTACCCATTCTTCACAAAGGAGCTCTGATCATGTTAGGCCTGGTTTCTCTAAGGTCTTCGTTGCTAAAGAGAAAATGCCTATTAAGGTACTTGTAGATATTGGAGAATTGATTAGCCTTTCTGTGGACCATAACCAAATTAGTAAAGTTTTGGTTGGAACTACACATTTTAACCGTATTGATATAGTGACTACTTCAGATCCTTTAAGTGGATTATACATTGGCGCTCATGGCATGTATACCTCCGAGCTTCTCTATTTGAAACGGAGATTTGGTCATTGGCATGAAGATGATGGAATTAAAAAGCCCAAGGATCTGGAGTTTTATGAGTATGTTGAAGCCTATAAGTTGTCTGGGGCTCTATCAATACCCGCTGGGCAGGTTGTTTTCCGCGCAAAGATTGGCAAGAAAAACCAACTTCCTCACAAGGGTATAATACCCGAAGAATTAGGCGTGATTGCTCGATACAGGGCTCAAGGAAGGCTTGCTGAACCTGGATTCCAAAATCCTCGGTGGGTTGACGGAGAGCTTATTATTCTCGATGGGAAGAATATCAGAAGCGGCCCTGTTATTGGATTCCTTTACTTGGCTCCTGAGCATCATTTCTTGGTGTTTTTCAACCGGTTAATGCTTCCAGCCTAAACTAACGGATTATATGCAAGTTTCAAGATCAAGAGTTCGTCTTTGAAGAAAGGTGCTAAGAACCAAGCA

Network for GWHGAAEX018131

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12014.7	DUF3506	488	615	7.70E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.700
SRP064423	SRR2545915	Juvenile tuber	57.490
SRP108465	SRR5643513	five period of Gastrodia elata	35.490
	SRR5643514	five period of Gastrodia elata	31.610
	SRR5643515	five period of Gastrodia elata	29.180
	SRR5643524	five period of Gastrodia elata	29.580
	SRR5643525	five period of Gastrodia elata	20.310
	SRR5643528	five period of Gastrodia elata	17.000
	SRR5643658	five period of Gastrodia elata	20.110
	SRR5643659	five period of Gastrodia elata	46.520
	SRR5643660	five period of Gastrodia elata	38.670
	SRR5643661	five period of Gastrodia elata	43.770
	SRR5643662	five period of Gastrodia elata	43.890
	SRR5643663	five period of Gastrodia elata	45.050
	SRR5643664	five period of Gastrodia elata	44.270
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	46.130
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.230
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.670
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	57.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	61.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	64.160
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	50.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	53.400
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.450
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	41.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	27.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	27.940
SRP279888	Gastro	Gastrodia elata tuber	39.98
	Juven	Juvenile tuber	57.23
	Mother_Gastro	Mother tuber of Gastrodia elata	23.23
	Mother_Juven	Mother tuber of Juvenile	40.53