Detail information of GWHGAAEX018147/evm.TU.scaffold_90.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34682.00E-37NADH:ubiquinone oxidoreductase, NDUFB7/B18 subunit
nrgi|695021033|ref|XP_009397591.1|3.35E-53PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SKC9|NDUB7_ARATH6.00E-38NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
trEMBLtr|A0A061E9E3|A0A061E9E3_THECC4.00E-47NADH-ubiquinone oxidoreductase B18 subunit, putative isoform 1 {ECO:0000313|EMBL:EOY01223.1}
TAIRAT2G020502.00E-37NADH-ubiquinone oxidoreductase B18 subunit, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097528911553738+
Transcript Sequence

Network for GWHGAAEX018147

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05676.12NDUF_B718805.20E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03963NDUFB7 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0003954Molecular FunctionNADH dehydrogenase activity
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activity
GO:0005739Cellular Componentmitochondrion

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms57.330
SRR2545915Juvenile tuber66.820
SRP108465SRR5643513five period of Gastrodia elata121.180
SRR5643514five period of Gastrodia elata144.240
SRR5643515five period of Gastrodia elata120.760
SRR5643524five period of Gastrodia elata142.880
SRR5643525five period of Gastrodia elata163.060
SRR5643528five period of Gastrodia elata204.560
SRR5643658five period of Gastrodia elata141.900
SRR5643659five period of Gastrodia elata112.530
SRR5643660five period of Gastrodia elata112.350
SRR5643661five period of Gastrodia elata130.900
SRR5643662five period of Gastrodia elata122.380
SRR5643663five period of Gastrodia elata118.550
SRR5643664five period of Gastrodia elata116.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_197.600
SRR6049655Rhizomagastrodiae_C368-T10_good_1164.510
SRR6049656Rhizomagastrodiae_C368-T07_good_1106.240
SRR6049657Rhizomagastrodiae_C368-T07_good_190.770
SRR6049658Rhizomagastrodiae_C368-T04_good_183.930
SRR6049659Rhizomagastrodiae_C368-T04_good_175.510
SRR6049660Rhizomagastrodiae_C368-T01_good_177.040
SRR6049661Rhizomagastrodiae_C368-T04_good_177.120
SRR6049662Rhizomagastrodiae_C368-T01_good_199.990
SRR6049663Rhizomagastrodiae_C368-T01_good_192.290
SRR6049664Rhizomagastrodiae_C368-T10_good_1144.450
SRR6049665Rhizomagastrodiae_C368-T10_good_1144.450
SRP279888GastroGastrodia elata tuber 102.05
JuvenJuvenile tuber103.38
Mother_GastroMother tuber of Gastrodia elata 119.76
Mother_JuvenMother tuber of Juvenile 116.68