Detail information of GWHGAAEX018149/evm.TU.scaffold_90.27


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10523.00E-32Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
nrgi|695060541|ref|XP_009418664.1|7.25E-39PREDICTED: glutamate receptor 3.3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C8E7|GLR33_ARATH8.00E-33Glutamate receptor 3.3 (Precursor)
trEMBLtr|M0U2Z7|M0U2Z7_MUSAM3.00E-39Glutamate receptor {ECO:0000256|PIRNR:PIRNR037090}
TAIRAT1G425403.00E-32glutamate receptor 3.3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097572072572485+
Transcript Sequence

Network for GWHGAAEX018149

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.080
SRR2545915Juvenile tuber2.700
SRP108465SRR5643513five period of Gastrodia elata16.820
SRR5643514five period of Gastrodia elata13.480
SRR5643515five period of Gastrodia elata9.150
SRR5643524five period of Gastrodia elata9.640
SRR5643525five period of Gastrodia elata3.920
SRR5643528five period of Gastrodia elata1.880
SRR5643658five period of Gastrodia elata1.420
SRR5643659five period of Gastrodia elata4.950
SRR5643660five period of Gastrodia elata13.990
SRR5643661five period of Gastrodia elata5.220
SRR5643662five period of Gastrodia elata17.760
SRR5643663five period of Gastrodia elata4.700
SRR5643664five period of Gastrodia elata7.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.710
SRR6049655Rhizomagastrodiae_C368-T10_good_125.750
SRR6049656Rhizomagastrodiae_C368-T07_good_131.060
SRR6049657Rhizomagastrodiae_C368-T07_good_119.070
SRR6049658Rhizomagastrodiae_C368-T04_good_119.070
SRR6049659Rhizomagastrodiae_C368-T04_good_122.820
SRR6049660Rhizomagastrodiae_C368-T01_good_136.730
SRR6049661Rhizomagastrodiae_C368-T04_good_115.830
SRR6049662Rhizomagastrodiae_C368-T01_good_135.220
SRR6049663Rhizomagastrodiae_C368-T01_good_140.380
SRR6049664Rhizomagastrodiae_C368-T10_good_136.890
SRR6049665Rhizomagastrodiae_C368-T10_good_136.890
SRP279888GastroGastrodia elata tuber 11.36
JuvenJuvenile tuber24.63
Mother_GastroMother tuber of Gastrodia elata 7.44
Mother_JuvenMother tuber of Juvenile 7.37