Detail information of GWHGAAEX018150/evm.TU.scaffold_90.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|557694902|ref|YP_008797956.1|1.00E-13ubiquitin-conjugating enzyme E2-like protein [Candidatus Caldiarchaeum subterraneum]
KOGKOG04166.00E-100Ubiquitin-protein ligase
nrgi|672140905|ref|XP_008794268.1|7.86E-110PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Phoenix dactylifera]
Swissprottr|P42749|UBC5_ARATH5.00E-104Ubiquitin-conjugating enzyme E2 5
trEMBLtr|A5B1R0|A5B1R0_VITVI4.00E-108Putative uncharacterized protein {ECO:0000313|EMBL:CAN74060.1}
TAIRAT5G413406.00E-100ubiquitin conjugating enzyme 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097584872595842-
Transcript Sequence

Network for GWHGAAEX018150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con501823.00E-39
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10576UBE2H, UBC8 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.780
SRR2545915Juvenile tuber127.900
SRP108465SRR5643513five period of Gastrodia elata76.360
SRR5643514five period of Gastrodia elata92.330
SRR5643515five period of Gastrodia elata96.520
SRR5643524five period of Gastrodia elata121.870
SRR5643525five period of Gastrodia elata83.370
SRR5643528five period of Gastrodia elata69.100
SRR5643658five period of Gastrodia elata115.820
SRR5643659five period of Gastrodia elata109.930
SRR5643660five period of Gastrodia elata100.110
SRR5643661five period of Gastrodia elata122.570
SRR5643662five period of Gastrodia elata112.650
SRR5643663five period of Gastrodia elata147.920
SRR5643664five period of Gastrodia elata98.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.360
SRR6049655Rhizomagastrodiae_C368-T10_good_116.110
SRR6049656Rhizomagastrodiae_C368-T07_good_135.650
SRR6049657Rhizomagastrodiae_C368-T07_good_126.010
SRR6049658Rhizomagastrodiae_C368-T04_good_121.190
SRR6049659Rhizomagastrodiae_C368-T04_good_114.100
SRR6049660Rhizomagastrodiae_C368-T01_good_125.850
SRR6049661Rhizomagastrodiae_C368-T04_good_124.120
SRR6049662Rhizomagastrodiae_C368-T01_good_152.840
SRR6049663Rhizomagastrodiae_C368-T01_good_134.280
SRR6049664Rhizomagastrodiae_C368-T10_good_150.280
SRR6049665Rhizomagastrodiae_C368-T10_good_150.280
SRP279888GastroGastrodia elata tuber 103.68
JuvenJuvenile tuber58.14
Mother_GastroMother tuber of Gastrodia elata 19.39
Mother_JuvenMother tuber of Juvenile 41.21