Detail information of GWHGAAEX018151/evm.TU.scaffold_90.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108802877|ref|YP_642814.1|5.00E-28serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOGKOG00320Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|225428322|ref|XP_002282994.1|0PREDICTED: calcium-dependent protein kinase 26 isoform X2 [Vitis vinifera]
Swissprottr|Q38872|CDPK6_ARATH0Calcium-dependent protein kinase 6
trEMBLtr|F6I0Q9|F6I0Q9_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB60525.1}
TAIRAT2G172900Calcium-dependent protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097637607649611-
Transcript Sequence

Network for GWHGAAEX018151

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase883461.30E-71
PF13499.5EF-hand_73944533.60E-11
PF13499.5EF-hand_74655252.50E-12
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
K13412CPK Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005509Molecular Functioncalcium ion binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.580
SRR2545915Juvenile tuber47.240
SRP108465SRR5643513five period of Gastrodia elata58.450
SRR5643514five period of Gastrodia elata50.050
SRR5643515five period of Gastrodia elata54.200
SRR5643524five period of Gastrodia elata49.590
SRR5643525five period of Gastrodia elata53.940
SRR5643528five period of Gastrodia elata48.010
SRR5643658five period of Gastrodia elata51.550
SRR5643659five period of Gastrodia elata73.160
SRR5643660five period of Gastrodia elata69.150
SRR5643661five period of Gastrodia elata65.450
SRR5643662five period of Gastrodia elata73.990
SRR5643663five period of Gastrodia elata65.620
SRR5643664five period of Gastrodia elata54.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.000
SRR6049655Rhizomagastrodiae_C368-T10_good_141.920
SRR6049656Rhizomagastrodiae_C368-T07_good_158.140
SRR6049657Rhizomagastrodiae_C368-T07_good_154.350
SRR6049658Rhizomagastrodiae_C368-T04_good_150.340
SRR6049659Rhizomagastrodiae_C368-T04_good_157.150
SRR6049660Rhizomagastrodiae_C368-T01_good_156.300
SRR6049661Rhizomagastrodiae_C368-T04_good_157.620
SRR6049662Rhizomagastrodiae_C368-T01_good_168.300
SRR6049663Rhizomagastrodiae_C368-T01_good_158.660
SRR6049664Rhizomagastrodiae_C368-T10_good_164.440
SRR6049665Rhizomagastrodiae_C368-T10_good_164.440
SRP279888GastroGastrodia elata tuber 56.87
JuvenJuvenile tuber65.85
Mother_GastroMother tuber of Gastrodia elata 45.08
Mother_JuvenMother tuber of Juvenile 54.25