Detail information of GWHGAAEX018153/evm.TU.scaffold_90.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|256823263|ref|YP_003147226.1|0S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
KOGKOG00220Alcohol dehydrogenase, class III
nrgi|743836302|ref|XP_010936050.1|0PREDICTED: alcohol dehydrogenase class-3 [Elaeis guineensis]
Swissprottr|A2XAZ3|ADHX_ORYSI0Alcohol dehydrogenase class-3
trEMBLtr|M0RXD7|M0RXD7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P05790_001}
TAIRAT5G439400GroES-like zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097712603728347-
Transcript Sequence

Network for GWHGAAEX018153

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N351624.20E-24
PF00107.25ADH_zinc_N2063311.80E-23
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00121frmA, ADH5, adhC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Degradation of aromatic compoundsmap01220
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Fatty acid degradationmap00071
Tyrosine metabolismmap00350
Retinol metabolismmap00830
Chloroalkane and chloroalkene degradationmap00625
Naphthalene degradationmap00626
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006069Biological Processethanol oxidation
GO:0016491Molecular Functionoxidoreductase activity
GO:0051903Molecular FunctionS-(hydroxymethyl)glutathione dehydrogenase activity
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms191.650
SRR2545915Juvenile tuber212.570
SRP108465SRR5643513five period of Gastrodia elata282.630
SRR5643514five period of Gastrodia elata307.810
SRR5643515five period of Gastrodia elata271.420
SRR5643524five period of Gastrodia elata334.260
SRR5643525five period of Gastrodia elata289.110
SRR5643528five period of Gastrodia elata302.780
SRR5643658five period of Gastrodia elata236.870
SRR5643659five period of Gastrodia elata233.230
SRR5643660five period of Gastrodia elata272.610
SRR5643661five period of Gastrodia elata253.840
SRR5643662five period of Gastrodia elata210.260
SRR5643663five period of Gastrodia elata207.360
SRR5643664five period of Gastrodia elata228.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1294.820
SRR6049655Rhizomagastrodiae_C368-T10_good_1326.720
SRR6049656Rhizomagastrodiae_C368-T07_good_1327.180
SRR6049657Rhizomagastrodiae_C368-T07_good_1282.530
SRR6049658Rhizomagastrodiae_C368-T04_good_1331.020
SRR6049659Rhizomagastrodiae_C368-T04_good_1354.990
SRR6049660Rhizomagastrodiae_C368-T01_good_1345.410
SRR6049661Rhizomagastrodiae_C368-T04_good_1335.570
SRR6049662Rhizomagastrodiae_C368-T01_good_1392.040
SRR6049663Rhizomagastrodiae_C368-T01_good_1376.380
SRR6049664Rhizomagastrodiae_C368-T10_good_1374.900
SRR6049665Rhizomagastrodiae_C368-T10_good_1374.900
SRP279888GastroGastrodia elata tuber 288.47
JuvenJuvenile tuber281.43
Mother_GastroMother tuber of Gastrodia elata 263.75
Mother_JuvenMother tuber of Juvenile 356.59