Detail information of GWHGAAEX018164/evm.TU.scaffold_90.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13030Amino acid transporters
nrgi|672200165|ref|XP_008777808.1|0PREDICTED: lysine histidine transporter-like 8 [Phoenix dactylifera]
Swissprottr|Q9SX98|LHTL8_ARATH0Lysine histidine transporter-like 8
trEMBLtr|M0TQ25|M0TQ25_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P13220_001}
TAIRAT1G476700Transmembrane amino acid transporter family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000097951079954624-
Transcript Sequence

Network for GWHGAAEX018164

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.17Aa_trans744849.60E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.680
SRR2545915Juvenile tuber7.600
SRP108465SRR5643513five period of Gastrodia elata19.520
SRR5643514five period of Gastrodia elata5.040
SRR5643515five period of Gastrodia elata66.360
SRR5643524five period of Gastrodia elata17.190
SRR5643525five period of Gastrodia elata2.300
SRR5643528five period of Gastrodia elata37.780
SRR5643658five period of Gastrodia elata8.270
SRR5643659five period of Gastrodia elata106.030
SRR5643660five period of Gastrodia elata42.920
SRR5643661five period of Gastrodia elata48.200
SRR5643662five period of Gastrodia elata71.900
SRR5643663five period of Gastrodia elata23.710
SRR5643664five period of Gastrodia elata38.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.360
SRR6049655Rhizomagastrodiae_C368-T10_good_14.100
SRR6049656Rhizomagastrodiae_C368-T07_good_14.230
SRR6049657Rhizomagastrodiae_C368-T07_good_15.360
SRR6049658Rhizomagastrodiae_C368-T04_good_12.670
SRR6049659Rhizomagastrodiae_C368-T04_good_12.590
SRR6049660Rhizomagastrodiae_C368-T01_good_111.140
SRR6049661Rhizomagastrodiae_C368-T04_good_12.820
SRR6049662Rhizomagastrodiae_C368-T01_good_13.980
SRR6049663Rhizomagastrodiae_C368-T01_good_14.220
SRR6049664Rhizomagastrodiae_C368-T10_good_15.120
SRR6049665Rhizomagastrodiae_C368-T10_good_15.120
SRP279888GastroGastrodia elata tuber 12.75
JuvenJuvenile tuber94.53
Mother_GastroMother tuber of Gastrodia elata 225.95
Mother_JuvenMother tuber of Juvenile 153.73