Detail information of GWHGAAEX018169/evm.TU.scaffold_90.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG25004.00E-96Uncharacterized conserved protein
nrgi|661892599|emb|CDP03757.1|1.00E-144unnamed protein product [Coffea canephora]
Swissprottr|Q681Q7|Y1390_ARATH9.00E-109Uncharacterized protein At1g03900
trEMBLtr|A0A068U650|A0A068U650_COFCA4.00E-145Coffea canephora
TAIRAT1G03900_14.00E-96Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009711992041224217+
Transcript Sequence

Network for GWHGAAEX018169

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07933.13DUF1681111731.00E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006897Biological Processendocytosis
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.960
SRR2545915Juvenile tuber33.450
SRP108465SRR5643513five period of Gastrodia elata47.160
SRR5643514five period of Gastrodia elata40.050
SRR5643515five period of Gastrodia elata46.810
SRR5643524five period of Gastrodia elata44.830
SRR5643525five period of Gastrodia elata83.410
SRR5643528five period of Gastrodia elata69.300
SRR5643658five period of Gastrodia elata73.660
SRR5643659five period of Gastrodia elata46.180
SRR5643660five period of Gastrodia elata45.640
SRR5643661five period of Gastrodia elata49.340
SRR5643662five period of Gastrodia elata52.380
SRR5643663five period of Gastrodia elata45.290
SRR5643664five period of Gastrodia elata49.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.030
SRR6049655Rhizomagastrodiae_C368-T10_good_141.000
SRR6049656Rhizomagastrodiae_C368-T07_good_143.140
SRR6049657Rhizomagastrodiae_C368-T07_good_140.270
SRR6049658Rhizomagastrodiae_C368-T04_good_143.910
SRR6049659Rhizomagastrodiae_C368-T04_good_147.240
SRR6049660Rhizomagastrodiae_C368-T01_good_141.390
SRR6049661Rhizomagastrodiae_C368-T04_good_142.250
SRR6049662Rhizomagastrodiae_C368-T01_good_141.910
SRR6049663Rhizomagastrodiae_C368-T01_good_145.010
SRR6049664Rhizomagastrodiae_C368-T10_good_140.010
SRR6049665Rhizomagastrodiae_C368-T10_good_140.010
SRP279888GastroGastrodia elata tuber 65.76
JuvenJuvenile tuber39.81
Mother_GastroMother tuber of Gastrodia elata 60.54
Mother_JuvenMother tuber of Juvenile 49.43