Detail information of GWHGAAEX018177/evm.TU.scaffold_90.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|311114030|ref|YP_003985251.1|3.00E-31non-specific serine/threonine protein kinase [Gardnerella vaginalis ATCC 14019]
KOGKOG00327.00E-88Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nrgi|672123759|ref|XP_008785247.1|5.47E-141PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like [Phoenix dactylifera]
Swissprottr|Q93VK0|PPCK2_ARATH4.00E-89Phosphoenolpyruvate carboxylase kinase 2
trEMBLtr|A5BNK1|A5BNK1_VITVI1.00E-120Putative uncharacterized protein {ECO:0000313|EMBL:CAN74792.1}
TAIRAT1G086507.00E-88phosphoenolpyruvate carboxylase kinase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009716602331661462+
Transcript Sequence

Network for GWHGAAEX018177

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase112642.90E-66
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CDPK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.600
SRR2545915Juvenile tuber67.460
SRP108465SRR5643513five period of Gastrodia elata33.860
SRR5643514five period of Gastrodia elata33.510
SRR5643515five period of Gastrodia elata42.940
SRR5643524five period of Gastrodia elata30.820
SRR5643525five period of Gastrodia elata94.830
SRR5643528five period of Gastrodia elata24.070
SRR5643658five period of Gastrodia elata230.750
SRR5643659five period of Gastrodia elata98.350
SRR5643660five period of Gastrodia elata86.980
SRR5643661five period of Gastrodia elata136.420
SRR5643662five period of Gastrodia elata74.700
SRR5643663five period of Gastrodia elata69.790
SRR5643664five period of Gastrodia elata70.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_146.600
SRR6049655Rhizomagastrodiae_C368-T10_good_121.590
SRR6049656Rhizomagastrodiae_C368-T07_good_154.570
SRR6049657Rhizomagastrodiae_C368-T07_good_138.550
SRR6049658Rhizomagastrodiae_C368-T04_good_128.690
SRR6049659Rhizomagastrodiae_C368-T04_good_122.940
SRR6049660Rhizomagastrodiae_C368-T01_good_130.760
SRR6049661Rhizomagastrodiae_C368-T04_good_123.500
SRR6049662Rhizomagastrodiae_C368-T01_good_144.270
SRR6049663Rhizomagastrodiae_C368-T01_good_131.780
SRR6049664Rhizomagastrodiae_C368-T10_good_148.320
SRR6049665Rhizomagastrodiae_C368-T10_good_148.320
SRP279888GastroGastrodia elata tuber 62.73
JuvenJuvenile tuber9.34
Mother_GastroMother tuber of Gastrodia elata 35.00
Mother_JuvenMother tuber of Juvenile 5.37