Detail information of GWHGAAEX018191/evm.TU.scaffold_90.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG33874.00E-4360S ribosomal protein 15.5kD/SNU13, NHP2/L7A family (includes ribonuclease P subunit p38), involved in splicing
nrgi|672163707|ref|XP_008801709.1|1.51E-56PREDICTED: uncharacterized protein LOC103715748 [Phoenix dactylifera]
trEMBLtr|K3ZX98|K3ZX98_SETIT3.00E-53Uncharacterized protein {ECO:0000313|EnsemblPlants:Si031230m}
TAIRAT4G017904.00E-43Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009725025052510051-
Transcript Sequence

Network for GWHGAAEX018191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01248.25Ribosomal_L7Ae1091641.50E-05
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms82.620
SRR2545915Juvenile tuber82.290
SRP108465SRR5643513five period of Gastrodia elata44.230
SRR5643514five period of Gastrodia elata48.420
SRR5643515five period of Gastrodia elata47.110
SRR5643524five period of Gastrodia elata43.700
SRR5643525five period of Gastrodia elata51.110
SRR5643528five period of Gastrodia elata51.420
SRR5643658five period of Gastrodia elata64.990
SRR5643659five period of Gastrodia elata74.840
SRR5643660five period of Gastrodia elata54.540
SRR5643661five period of Gastrodia elata56.850
SRR5643662five period of Gastrodia elata90.830
SRR5643663five period of Gastrodia elata78.580
SRR5643664five period of Gastrodia elata94.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.150
SRR6049655Rhizomagastrodiae_C368-T10_good_166.060
SRR6049656Rhizomagastrodiae_C368-T07_good_152.940
SRR6049657Rhizomagastrodiae_C368-T07_good_151.550
SRR6049658Rhizomagastrodiae_C368-T04_good_133.530
SRR6049659Rhizomagastrodiae_C368-T04_good_132.440
SRR6049660Rhizomagastrodiae_C368-T01_good_145.860
SRR6049661Rhizomagastrodiae_C368-T04_good_134.660
SRR6049662Rhizomagastrodiae_C368-T01_good_147.380
SRR6049663Rhizomagastrodiae_C368-T01_good_142.640
SRR6049664Rhizomagastrodiae_C368-T10_good_155.800
SRR6049665Rhizomagastrodiae_C368-T10_good_155.800
SRP279888GastroGastrodia elata tuber 57.76
JuvenJuvenile tuber51.41
Mother_GastroMother tuber of Gastrodia elata 30.75
Mother_JuvenMother tuber of Juvenile 30.56